OK, you're using an older version that did not copy the volume. You can
just do this
cp subject/surf/lh.volume subject/surf/rh.volume
Note the change from lh to rh!
doug
On 04/28/2014 06:25 PM, Yizhou Ma wrote:
Thanks Doug. I don't see an error message in xhemireg.?h.log files.
Please
There should be a ?h.volume file. Are you sure there is not? You can
specify -meas volume when you run mris_preproc
doug
On 04/27/2014 08:35 PM, Yizhou Ma wrote:
Dear freesurfer experts,
I am working on a project on cortical asymmetry and I have analyzed
vertex-wise cortical
Thanks Doug. I have ?h.volume in subject/surf but not in
subject/xhemi/surf. I followed this page
http://surfer.nmr.mgh.harvard.edu/fswiki/Xhemi and I think it is a problem
with surfreg rather than mris_preproc. Can I just copy the ?h.volume from
subject/surf to subject/xhemi/surf?
Best,
Cherry
Thanks Doug. I don't see an error message in xhemireg.?h.log files. Please
see attached for the files.
On Mon, Apr 28, 2014 at 4:22 PM, Douglas N Greve
gr...@nmr.mgh.harvard.eduwrote:
Then something went wrong along the way. Check the xhemi/xhemireg.?h.log
to see if there is an error. If
Hi Doug,
I just read from the .log files that the lh.thickness/area/pial/... files
in subject/xhemi/surf are copied from subject/surf at the end of the
command. Thus it seems that I can just copy lh.volume, too?
Thanks,
Cherry
On Mon, Apr 28, 2014 at 6:25 PM, Yizhou Ma ym...@nyu.edu wrote:
Dear freesurfer experts,
I am working on a project on cortical asymmetry and I have analyzed
vertex-wise cortical thickness/surface area asymmetry. However, I noticed
that Freesurfer doesn't not seem to facilitate such analysis for gray
matter volume, as after running surfreg -xhemi there is no
