External Email - Use Caution
Hi Doug,
I'm using this command:
mri_label2label --srclabel lh.fusiform.label --trglabel output.label --s
sub01 --regmethod surface --hemi lh --outmask outmask.gii
Best regards,
Sam
On Fri, Jul 10, 2020 at 9:48 PM Douglas N. Greve
wrote:
> what's
what's your mri_label2label command?
On 7/10/2020 3:05 PM, Sam W wrote:
External Email - Use Caution
Hi Doug and Tim,
I'm running probtrackx with freesurfer surfaces as seeds. However
probtrackx requires a file that contains both the whole surface file
(eg, lh.pial) as well as the
External Email - Use Caution
Hi Doug and Tim,
I'm running probtrackx with freesurfer surfaces as seeds. However
probtrackx requires a file that contains both the whole surface file (eg,
lh.pial) as well as the overlay (the scalar values associated with the
vertices of the roi).
I
what do you mean merge with the pial?
On 7/9/2020 8:07 PM, Sam W wrote:
External Email - Use Caution
It works great Doug, thanks a lot!
Can I ask you a follow up question please? I created the overlay with
mri_label2label using --outmask as you suggested, but now I'd like to
merge
External Email - Use Caution
It should just work when displayed on the pial surface, the vertex indices are
equivalent. Did you try it?
Or what exactly do you mean by 'merging' with the pial surface?
Tim
> On July 10, 2020 at 2:07 AM Sam W wrote:
>
>
> External
External Email - Use Caution
It works great Doug, thanks a lot!
Can I ask you a follow up question please? I created the overlay with
mri_label2label using --outmask as you suggested, but now I'd like to merge
that overlay with the pial surface (lh.pial). Is there a tool I can use
Use mri_label2label with the --outmask option
On 7/8/2020 10:14 PM, Sam W wrote:
External Email - Use Caution
Hi,
Is there a way to convert a label file into a surface/overlay? Thank you!
Best regards,
Sam
___
Freesurfer mailing list
External Email - Use Caution
Hi,
Is there a way to convert a label file into a surface/overlay? Thank you!
Best regards,
Sam
___
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
