Re: [Freesurfer] mri_segstats --avgwf output question

2023-08-11 Thread Douglas N. Greve
External Email - Use Caution It is going to list the cluster=0 value as the first value. cluster=0 are all the voxels not in a cluster. If you want to exclude this, just add --excludeid 0 On 8/10/2023 7:58 PM, Lara Foland-Ross wrote: External Email - Use Caution Hi

[Freesurfer] mri_segstats --avgwf output question

2023-08-10 Thread Lara Foland-Ross
External Email - Use Caution Hi there, I'm running mri_segstats on a collection of clusters resulting from a statistical analysis. My command line usage is as follows:   mri_segstats --i lh.fwhm10.thickness.mgh --avgwf clusterAverages.txt --seg cache.th13abs.sig.ocn.mgh