Re: [Freesurfer] mri_segstats and mris_anatomical_stats read out different # of rois

2019-02-28 Thread Greve, Douglas N.,Ph.D.
which ROIs are different? On 2/22/19 5:39 PM, Winkelbeiner, Stephanie A wrote: > > External Email - Use Caution > > Hi Freesurfers, > > I’m trying to read out GM and WM values from parcels (ROIs) but get a > different amount of ROIs for GM and WM. > > I use the following commands

[Freesurfer] mri_segstats and mris_anatomical_stats read out different # of rois

2019-02-22 Thread Winkelbeiner, Stephanie A
External Email - Use Caution Hi Freesurfers, I'm trying to read out GM and WM values from parcels (ROIs) but get a different amount of ROIs for GM and WM. I use the following commands (embedded in a loop), for GM mris_anatomical_stats -mgz \ -cortex