Re: [Freesurfer] Freesurfer- subcortical group analysis

le command. > doug > > > On 5/27/2021 7:13 AM, Aldinhas De Freitas Ferreira, Francisca wrote: > > External Email - Use Caution > Dear Dr Greve, > > My name is Francisca Ferreira, I am a neurosurgeon/neuroimaging PhD > student at the FIL in UCL. I have recently co

Re: [Freesurfer] (no subject)

: > How did you create the sig.mgh that you are trying to overlay? > > On 5/28/2021 11:16 AM, Francisca Ferreira wrote: > > External Email - Use Caution > Dear Experts, > > I have extracted subcortical vols corrected for intracranial vols using > asegstats2table

[Freesurfer] (no subject)

External Email - Use Caution Dear Experts, I have extracted subcortical vols corrected for intracranial vols using asegstats2table and I ran mri_glmfit using the following command mri_glmfit \--table aseg.txt \--fsgd newCH_deblank3.fsgd dods \--C groupdiff.mtx \--glmdir

[Freesurfer] mri_glm fit: gd2mtx method dods--C unrecoginzied

External Email - Use Caution Dear Experts, I am new to FS. I'm trying to run mri_glm fit I've created FSGD with 2 classes -responders vs non-responders to a given intervention- and 3 variables to be regressed out-according age, gender, laterality. I've made my FSGD file is made