Re: [galaxy-dev] bowtie2: no stderr output

2014-11-09 Thread Elizabeth Chia
Dear John Thank you for responding. Not too sure why I can't see your link unfortunately, but did you mean this? http://dev.list.galaxyproject.org/bowtie-wrapper-td4658698.html I've tried modifying the command but doesn't seem to work either. And I can't use the wrapper too? I've just updated

Re: [galaxy-dev] bowtie2: no stderr output

2014-11-02 Thread John Chilton
It looks like this was a problem for awhile but isn't anymore on main https://trello.com/c/yFeXvhUg. It doesn't look like there has been any changes to the bowtie2 wrapper since it was migrated to the tool shed so I am not sure why it isn't working for you? As an admin can you open a successful