On Wed, Jun 15, 2011 at 2:30 AM, Ka Ming Nip km...@bcgsc.ca wrote:
Hello,
I have been trying to set up Galaxy to run its jobs on my SGE
cluster using the Unified Method, based on the steps described
in the wiki:
https://bitbucket.org/galaxy/galaxy-central/wiki/Config/Cluster
My local
On Jun 15, 2011, at 3:36 PM, Kanwei Li wrote:
What is the version for numpy in your eggs.ini?
eggs.ini has numpy = 1.3.0. I have no local edits this is just a clean
checkout of galaxy-dist.
~Mike
On Wed, Jun 15, 2011 at 3:14 PM, Michael Steder ste...@ci.uchicago.edu
wrote:
Hi Nate,
Hi
We have been able to get the following setup working pretty reliably:
Automated deployment of Galaxy clusters on EC2. These clusters have the
following setup:
A NFS server providing global directories for home directories, software, and
scratch space. We are also experimenting with glusterfs
Ravi,
Do your galaxy jobs submit to the cluster as the galaxy user or as the user?
Thanks,
Ilya
Sent from my iPhone
On Jun 15, 2011, at 2:43 PM, Ravi Madduri
madd...@mcs.anl.govmailto:madd...@mcs.anl.gov wrote:
Hi
We have been able to get the following setup working pretty reliably:
*
I apologize for jumping on to this thread a bit late. I read below that there
is a plan to pull tools into a galaxy installation automagically. I wonder if
you plan on providing some kind of API to query the tool registry and discover
the tools and install them into an existing galaxy
