On Wed, 5 Jul 2006, Andrew Randles wrote:
I don't mean to ask a dumb question but how do I get at this gentoo
science overlay?
http://gentooscience.org/
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On Mon, 28 Aug 2006, Honza Mach??ek wrote:
Not experimenting with the ebuilds, just out of curiosity I've
downloaded FreeMat-2.0 sources from its page. After unpacking them I
have FreeMat-2.0/extern/Packages directory containing seamingly all the
dependencies for the package. There is
On Sun, 27 Aug 2006, Vadim wrote:
I can't build this ebuild, because the suggested link ends up with
downloading matio.zip which is of version 1.3.0, and it seemingly
differs from one that required (1.1.4), so I am out of luck...
Yes, there were backward-incompatible changes in matio.
I've fixed the downloading url for matio. Now
emerge freemat
should work completely automatically, without the need to download
anything by hand.
Andrey
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OK, I think I've fixed this problem with generating fonts during latexing
the documentation. Please try again.
Andrey
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On Tue, 29 Aug 2006, Markus Dittrich wrote:
On Wed, 30 Aug 2006, Andrey G. Grozin wrote:
1. Some ebuild (usually with the USE flag doc) starts latex
2. Some font used in the latex file has not yet been used on this
particular computer
3. latex starts metafont to generate this font
4
On Wed, 30 Aug 2006, Vadim wrote:
Can you please advice with following error on another Gentoo PC:
ast-math -fexceptions -O3 -march=i686 -pipe -fomit-frame-pointer
-mpreferred-sta ck-boundary=2 -falign-functions=0 -falign-jumps=0
-falign-loops=0 -c fortran/mat io_internal.c -o
On Wed, 30 Aug 2006, Vadim wrote:
Downloading
'http://distro.ibiblio.org/pub/linux/distributions/gentoo/distfiles/AMD.tar.gz'
--09:32:49--
http://distro.ibiblio.org/pub/linux/distributions/gentoo/distfiles/AMD.tar.gz
= `/usr/portage/distfiles/AMD.tar.gz'
Resolving
Hello *,
Is it just me, or is the gentooscience.org website working very unstable
lately? Failures are intermittent, but very often I see a python traceback
like this
Python traceback
Traceback (most recent call last):
File /usr/lib/python2.4/site-packages/trac/web/modpython_frontend.py,
On Wed, 30 Aug 2006, Vadim wrote:
Downloading
'http://www.cise.ufl.edu/research/sparse/UFconfig/current/UFconfig.tar.gz'
--22:34:06--
http://www.cise.ufl.edu/research/sparse/UFconfig/current/UFconfig.tar.gz
= `/usr/portage/distfiles/UFconfig.tar.gz'
Resolving www.cise.ufl.edu...
On Wed, 13 Sep 2006, Nuno Sucena Almeida wrote:
while visiting the gentoo science overlay website I get python errors,
which
disapear when I reload the page, but keeps popping up randomly...
Yes, this is exactly what I have reported some time ago. No progress yet
:-(
By the way, why
On Thu, 14 Sep 2006, Marcus D. Hanwell wrote:
Not sure about the links from the overlays.g.o, gentooscience.org was created
before the overlays think had even been discussed as a solution to a problem.
It is advertised here, and on the IRC channel but it would be good to get it
more widely
On Thu, 14 Sep 2006, Donnie Berkholz wrote:
Marcus D. Hanwell wrote:
Not sure about the links from the overlays.g.o, gentooscience.org was
created
before the overlays think had even been discussed as a solution to a
problem.
It is advertised here, and on the IRC channel but it would
On Fri, 15 Sep 2006, Marcus D. Hanwell wrote:
On Friday 15 September 2006 08:50, Andrey G. Grozin wrote:
On Thu, 14 Sep 2006, Donnie Berkholz wrote:
Pretty sure they're not interested in linking to external overlays. If
you want a link, and to save some time on maintenance and future
Hello *,
I am returning to the original subject of this thread :-)
This is what I got now when I pressed the Browse source button:
Oops...
Trac detected an internal error:
argument number 0: a 'apr_pool_t *' is expected,
On Sun, 21 Jan 2007, M. Edward (Ed) Borasky wrote:
On a related note, the Axiom ebuild in Portage is a tad old, I think. Axiom
now has two repositories, a silver and a gold branch. Both of them have
more recent source that what's in Portage. I'd recommend at least getting a
gold ebuild into
I hope I've fixed this. Please check.
Andrey
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On Wed, 24 Jan 2007, Yuriy Rusinov wrote:
I try to fetch new version of texmacs and receive error message
Downloading '
ftp://ftp.texmacs.org/pub/TeXmacs/targz/TeXmacs-1.0.6.8-src.tar.gz'
--16:51:09--
ftp://ftp.texmacs.org/pub/TeXmacs/targz/TeXmacs-1.0.6.8-src.tar.gz
=
On Wed, 24 Jan 2007, Yuriy Rusinov wrote:
Are you sure that you have fetched an uncorrupted copy of
TeXmacs-1.0.6.8-src.tar.gz ? My copy has the size 3835265.
Manifest has been generated from this copy, and contains this size (and
texmacs-1.0.6.8 emerges without any problems).
Of course
Further investigation of this detective story shows that not only the
file TeXmacs-1.0.6.8-src.tar.gz which I have (dated 18 Jan, size 3835265)
and the one currently at ftp.texmacs.org (dated 25 Jan, size 3836627)
differ; the directory trees unpacked from them also differ in many places.
So, I
Hello *,
I've just uploaded freemat-3.0.ebuild to gentooscience.org. Please try it.
I think it is becoming a serious competitor for octave and scilab. It
would be especially good if somebody couls try it on amd64.
Andrey
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gentoo-science@gentoo.org mailing list
On Fri, 4 May 2007, C Y wrote:
Which flags did you compile guile with? I think there needs to be one
active about supporting some kind of older functionality, but the
details escape me now. I had build failures until I fixed that - I'll
check tonight and see which one it was. The TeXmacs
On Sat, 5 May 2007, M. Edward (Ed) Borasky wrote:
Has that been pushed upstream to the TeXmacs team?
Not yet. I'll write to Joris. For now, a work-around for those who likes a
bleeding-edge guile was found: emerge guile with +deprecated.
By the way, can I check in pkg_setup that guile is
Hello *,
maxima-5.13.0 is in the science overlay. Also texmacs-1.0.6.10-r1 is
there; it contains a patch to run maxima-5.13.0.
Isn't it a good moment to move this to the main tree?
Andrey
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On Mon, 8 Oct 2007, Sbastien Fabbro wrote:
Just to inform you of the move of the official gentoo science overlay.
Unfortunately, it is still not mentioned at the main page
http://overlays.gentoo.org/
For people using layman, it has been updated.
Yes, I can confirm this.
Andrey
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-- Forwarded message --
Date: Mon, 8 Oct 2007 12:32:57 +0700 (NOVST)
From: Andrey G. Grozin [EMAIL PROTECTED]
To: [EMAIL PROTECTED]
Subject: extrema-4.2.9
Hello *,
I've just committed extrema-4.2.9 to the science overlay. I think it would be a
good idea to move extrema
On Sat, 13 Oct 2007, M. Edward (Ed) Borasky wrote:
Andrey G. Grozin wrote:
I've just committed extrema-4.2.9 to the science overlay. I think it would
be a good idea to move extrema to the mainline portage tree. What do you
think?
Sure ... but what does it do??
Data analyses
On Mon, 15 Oct 2007, Donnie Berkholz wrote:
I think a good way to start is to make the overlay an accepted
solution for where to keep packages. Get more people participating in
the overlay, and even be willing to move packages from the main tree to
the overlay if there's non-devs willing to help
Hello *,
As you may have noticed, I committed maxima-5.14.0 to the science overlay.
The 5.13.0 ebuild in the main tree is not good, from my point of view,
because it does not allow one to build maxima with several lisps, and I
definitely want this (to compare running times and, sometimes,
Hello *,
A long-awaited gle-4.1.0 appeared, to be quickly replaced by the 4.1.1
bugfix release. It contains a much improved qt4 gui for gle (though I
don't use this gui) plus a number of fixes and enhancements in the core
gle. I've committed sci-visualization/gle-4.1.1.ebuild to the science
On Sat, 12 Jan 2008, M. Edward (Ed) Borasky wrote:
gcl is a disaster waiting to happen from what I've heard. The project seems
stalled, and if you want a Common Lisp, your viable open source choices
appear to be clisp and sbcl.
Here I disagree. gcl development is not stalled. 2.7.0 will have a
I can build and test stuff only on x86. wxmaxima-0.7.4 is rather
experimental - it now uses wxGTK-2.8, not 2.6. Therefore, I feeled I can
only write ~x86. But now I included ~amd64 for convenience of those who
would like to try it on amd64 (and tell me the result).
Good news: there is an
Hello *,
I added the USE flag vim-syntax to gle-4.1.1; with this flag, it installs
vim support files.
I also bumped the version of extrema to 4.3.4. To make this less boring, I
switched from wxGTK-2.6 to 2.8. Compiles and works fine. I really think
that extrema should be in the main tree.
On Tue, 29 Apr 2008, M. Edward (Ed) Borasky wrote:
I use sbcl for all of my Common Lisp applications now. Will this require any
changes?
If you emerge maxima with USE flags emacs and latex, the new ebuild will
also install imaxima (and this is good). In this case you should unmerge
imaxima,
On Sat, 17 May 2008, Sbastien Fabbro wrote:
On Thu, 15 May 2008 18:24:35 +0700 (NOVST)
Andrey G. Grozin [EMAIL PROTECTED] wrote:
I propose *not* to use an external liborigin in qtiplot. Am I right
that liborigin is used only by qtiplot? Then it would be better to
get rid of sci-libs/liborigin
Hello *,
I've just committed sympy-0.6.2.ebuild to the science overlay. It differs
from the ebuild in sunrise: it builds and installs docs with USE=doc. I
intended it to use external mpmath and pyglet, but so far I haven't done
this - now (patched) versions of these packages are built with
On Thu, 28 Aug 2008, Mat?as Gra?a wrote:
It seems that pyglet is pulled in by useflag X.
What would I be missing if I emerge sympy with USE=-X ?
As things stand at the moment, nothing, because sympy will build its own
subset of pyglet. It is used for 2d and 3d plots which appear in separate
Hello *,
Math Graphics Library (mathgl), when emerged with USE=octave, installs
mathgl.tar.gz in /usr/share/mathgl/octave/ . This tarball contains
[EMAIL PROTECTED] /usr/share/mathgl/octave $ tar tf mathgl.tar.gz
mathgl/
mathgl/INDEX
mathgl/COPYING
mathgl/PKG_ADD
mathgl/inst/
On Tue, 9 Dec 2008, Markus Dittrich wrote:
Andrey G. Grozin a.g.gro...@inp.nsk.su writes:
How to install this as an octave package? Perhaps, octave-forge.eclass can
be used? Should I hack the mathgl ebuild so that it does this octave
installation (when USE=octave)? Or, maybe, there should
On Sat, 13 Dec 2008, Markus Dittrich wrote:
Maybe, instead of moving mathgl.tar.gz onto the live filesystem
we should just install the octave_forge like package via the
octave_forge.eclass when we build and install mathgl itself
(via a useflag).
This would be the best thing. mathgl already has
Hello,
I am trying to understand how to use the overlay (I mean read-write,
read-only usage is trivial - via layman). Following
[2] http://git.overlays.gentoo.org/
I do
gro...@laptop ~/git $ git clone
git+ssh://g...@git.overlays.gentoo.org/science
Initialized empty Git repository in
On Thu, 14 May 2009, George Shapovalov wrote:
Please answer here if you are not listed on the project page or if you want to
change your details there:
http://www.gentoo.org/proj/en/science/index.xml
I am not listed on this page
Andrey Grozin gro...@gentoo.org
Hello *,
I use the science overlay, and for quite some time I have problems with
blas/lapack. Each attempt to emerge -uD @world produces something like
[blocks B ] app-admin/eselect-blas
On Wed, 21 Dec 2011, Miguel de Val-Borro wrote:
There is also a warning about an unrecognized configure option:
configure: WARNING: unrecognized options: --with-gui
This package is a QA nightmare :-( It bundles modified sources of
x11-libs/fox (it does not compile with the system fox). First,
On Wed, 21 Dec 2011, Kacper Kowalik wrote:
Could somebody with amd64 check if sci-mathematics/reduce-20110414
compiles on this arch? You'll have to keyword it. Upstream says it
should compile.
It does and passes test suite. Though it doesn't respect libdir:
On Wed, 21 Dec 2011, Burcin Erocal wrote:
There is also Sage:
http://sagemath.org/
It's far from a toy or a specialized system (such as pari/gp,
Singular, Macaulay2, etc.). So it should be mentioned.
Of course, it's not a toy. To a large degree, it's a large collection of
existing software,
On Thu, 22 Dec 2011, Miguel de Val-Borro wrote:
I have upgraded from reduce-20110414 to reduce-20110414-r1 and got a file
collision during merging:
* sci-mathematics/reduce-20110414
* /usr/lib64/reduce/reduce.doc
* /usr/lib64/reduce/reduce.fonts
*
* Package
On Fri, 12 Oct 2012, Francois Bissey wrote:
Building maxima-5.26.0 with sbcl is now broken by the latest version of
asdf so the sbcl useflag needs to be masked for that particular version
of maxima. I remember getting the message during the compile of the sbcl
bits of maxima not the ecls ones
On Fri, 15 Jun 2018, Juergen Rose wrote:
I have similar errors, see e.g.: https://bugs.gentoo.org/658170,
https://bugs.gentoo.org/657984, https://bugs.gentoo.org/658034 or https
://bugs.gentoo.org/658026.
I have the feeling that theese problems with blas, lapack, atlas etc.
are not directly
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