I've never experienced this phenomenon prior to gentoo-sources-2.6.31.-r6.
I've always emerged gentoo-sources and they peacefully sat there and waited
until I built the corresponding kernel later when I felt like it - if ever.
With 2.6.31-r6, however, the emerge fails and consequently screws up 'emerge
world' attempts. PITA.
Any recommended workarounds or fixes?
;;;
I've pieced the following together from the console and elogv:
ERROR: preinst
This package will overwrite one or more files that may belong to other
packages (see list below). You can use a command such as `portageq
owners / filename` to identify the installed package that owns
a
file. If portageq reports that only one package owns a file then do
NOT file a bug report. A bug report is only useful if it identifies at
least two or more packages that are known to install the same file(s).
If a collision occurs and you can not explain where the file came from
then you should simply ignore the collision since there is not enough
information to determine if a real problem exists. Please do NOT file
a bug report at http://bugs.gentoo.org unless you report exactly which
two packages install the same file(s). Once again, please do NOT file
a bug report unless you have completely understood the above message.
package sys-kernel/gentoo-sources-2.6.31-r6 NOT merged
Detected file collision(s):
* /usr/src/linux-2.6.31-gentoo-r6/Makefile
* /usr/src/linux-2.6.31-gentoo-r6/Kbuild
gazillion similar ellided
* /usr/src/linux-2.6.31-gentoo-r6/include/asm-generic/bitops/lock.h
* /usr/src/linux-2.6.31-gentoo-r6/include/asm-generic/bitops/hweight.h
*
/usr/src/linux-2.6.31-gentoo-r6/include/asm-generic/bitops/non-atomic.h
*
* Searching all installed packages for file collisions...
*
* Press Ctrl-C to Stop
*
* None of the installed packages claim the file(s).
*
* Package 'sys-kernel/gentoo-sources-2.6.31-r6' NOT merged due to file
* collisions. If necessary, refer to your elog messages for the whole
* content of the above message.
Failed to install sys-kernel/gentoo-sources-2.6.31-r6, Log file:
WALRUS ~ # emerge
--info
Portage 2.1.6.13 (default/linux/amd64/10.0/desktop, gcc-4.3.4,
glibc-2.9_p20081201-r2, 2.6.30-gentoo-r4 x86_64)
=
System uname:
Linux-2.6.30-gentoo-r4-x86_64-AMD_Athlon-tm-_64_X2_Dual_Core_Processor_4200+-with-gentoo-1.12.13
Timestamp of tree: Wed, 06 Jan 2010 07:45:02
+
app-shells/bash: 4.0_p35
dev-java/java-config: 1.3.7-r1, 2.1.9-r2
dev-lang/python: 2.4.6, 2.5.4-r3, 2.6.4
dev-python/pycrypto: 2.0.1-r8
dev-util/cmake: 2.6.4-r3
sys-apps/baselayout: 1.12.13
sys-apps/sandbox:1.6-r2
sys-devel/autoconf: 2.13, 2.63-r1
sys-devel/automake: 1.4_p6, 1.5, 1.6.3, 1.7.9-r1, 1.8.5-r3, 1.9.6-r2,
1.10.2
sys-devel/binutils: 2.18-r3
sys-devel/gcc-config: 1.4.1
sys-devel/libtool: 2.2.6b
virtual/os-headers: 2.6.27-r2
ACCEPT_KEYWORDS=amd64
CBUILD=x86_64-pc-linux-gnu
CFLAGS=-march=athlon64 -O2 -pipe -msse3
CHOST=x86_64-pc-linux-gnu
CONFIG_PROTECT=/etc /usr/share/X11/xkb /usr/share/config
CONFIG_PROTECT_MASK=/etc/ca-certificates.conf /etc/env.d /etc/env.d/java/
/etc/fonts/fonts.conf /etc/gconf /etc/revdep-rebuild /etc/sandbox.d
/etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d
/etc/texmf/updmap.d /etc/texmf/web2c /etc/udev/rules.d
CXXFLAGS=-march=athlon64 -O2 -pipe -msse3
DISTDIR=/usr/portage/distfiles
FEATURES=ccache collision-protect distlocks fixpackages parallel-fetch
protect-owned sandbox sfperms strict unmerge-orphans userfetch
GENTOO_MIRRORS=http://gentoo.osuosl.org/
ftp://ftp.gtlib.gatech.edu/pub/gentoo http://mirrors.acm.cs.rpi.edu/gentoo/
http://open-systems.ufl.edu/mirrors/gentoo ftp://lug.mtu.edu/gentoo
ftp://gentoo.cites.uiuc.edu/pub/gentoo/
http://mirror.clarkson.edu/pub/distributions/gentoo/
LANG=en_US.utf8
LDFLAGS=-Wl,-O1
LINGUAS=en en_US
MAKEOPTS=-j3
PKGDIR=/usr/portage/packages
PORTAGE_CONFIGROOT=/
PORTAGE_RSYNC_OPTS=--recursive --links --safe-links --perms --times
--compress --force --whole-file --delete --stats --timeout=180
--exclude=/distfiles --exclude=/local --exclude=/packages
PORTAGE_TMPDIR=/var/tmp
PORTDIR=/usr/portage
PORTDIR_OVERLAY=/usr/local/portage/layman/java-binary
/usr/local/portage/layman/sunrise /usr/local/portage/layman/lisp
SYNC=rsync://rsync.namerica.gentoo.org/gentoo-portage
USE=X a52 aac acl acpi alsa amd64 apache2 berkdb blas bluetooth branding
bzip2 cairo cdr cjk cli consolekit cracklib crypt cups cxx dbus dri dts dvd
dvdr eds emacs emboss encode evo fam firefox flac fortran gdbm gif gpm
gstreamer gtk hal iconv ipv6 jpeg kde lapack ldap libnotify mad mikmod mmx
mng modules mp3 mp4 mpeg mudflap multilib ncurses nls nptl nptlonly nvidia
ogg opengl openmp oss pam