it large attachments, but you can send the files to me directly).
If I recall correctly, the general DME's stance on MIF was that people
should save/convert to GDEF, which is a more well-designed file format.
If you can do that it can probably
On Fri, Feb 23, 2024 at 09:00:50AM +0100, David Nečas (Yeti) wrote:
> On Fri, Feb 23, 2024 at 12:22:56AM +, Zhien Wang wrote:
> > Hi It seems I couldn’t attach any file to this message. Will try attach it
> > through the forum.
>
> You can upload the file somewhere an
build with HDF5
libraries. This should be done regardless as more and more HDF5 based
data formats are appearing – I am crrently adding fifth such to
Gwyddion…
Regards,
Yeti
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On Fri, Feb 16, 2024 at 03:45:20PM +0100, David Nečas (Yeti) wrote:
> On Thu, Feb 15, 2024 at 03:38:17PM +, Zhien Wang wrote:
> > I installed Gwyddion on Mac through MacPorts, X11, however the
> > Gwyddion cannot open .ARIS file, it shows an error “No module can loa
e relatively
easy to add. But we need some files. We *always* need the files that do
not open [correctly]. Other information can be useful too, but without
files, we cannot do anything.
Regards,
Yeti
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Gwyddion 2.65 is now available for download at
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Gwyddion 2.64 is now available for download at
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Gwyddion 2.63 is now available for download at
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On Wed, May 24, 2023 at 06:24:38PM +0200, David Nečas (Yeti) wrote:
> Dilation…
Reconstruction, of course.
Yeti
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ill kind of reverses the effect.
So, it depends.
Yeti
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On Sun, May 14, 2023 at 10:28:52AM +, Natnael K Kahssay wrote:
> > Please try tomorrow's or later development snapshot of Gwyddion.
> Is there a location where I can download the patched software now?
Right now you can compile it from subversi
apshot of Gwyddion.
Regards,
Yeti
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e a chunk of someone's
time and effort…
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Gwyddion 2.62 is now available for download at
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to install.
The latest version is 2.61, but it is probably not in the repo (yet),
and it should not matter anyway.
Yeti
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way which makes sense *and* works for all files, I
would be grateful…
Regards,
Yeti
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ally prefers simplicity and efficiency to resource
conservation so it can be sometimes memory hungry. But if you suspect a
memory leak please report it as a bug.
Regards,
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On Mon, May 02, 2022 at 11:17:27AM +0200, David Nečas (Yeti) wrote:
> Gwyddion 2.61 is now available for download…
…and the actual list of changes in 2.61 follows. Sorry about posting the
2.60 news instead.
Application:
- Translations updated: Czech, French, Russian.
- Command line: New opt
Gwyddion 2.61 is now available for download at
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Gwyddion 2.60 is now available for download at
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pixels high.
Regards,
Yeti
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f peak width estimate – if you need detailed peek
fitting (like in all kinds of spectroscopies), Graph Peaks is likely way
too simplistic for that.
Regards,
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Gwyddion 2.59 is now available for download at
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w this one away...
Regards,
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r image).
I do not understand what should happen to the other pixels then. In any
case it should not be necessary as all the functions can take into
account only the masked area.
Regards,
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. If you have to, use Straighten Path to straighten
curved fibres. Do not use too short segments.
I would still call not the process measurement, maybe rough estimation…
Regards,
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managed to
somehow entangle multiple versions of Gwyddion (or some partial
installations or leftovers were getting in the way). Then cleanup and
reinstallation was usually the right fix – so it is what the message
suggests. But here Gwyddion comes neatl
Gwyddion 2.58 is now available for download at
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nouncing the next version came up, I just
> wanted to mention it beforehand.
If I recall correctly, I even tweaked the linking slightly in response
to the Ubuntu breakage. However, the program works fine when built
from source code (all versions I tried). So the dev
e data do not have
high dynamic range the result will look fine.
Yeti
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Gwyddion 2.57 is now available for download at
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‘Include only masked
region’ in the Statistical quantities tool.
Yeti
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nd end at an major tick, which might not be a problem for range
like [-3,3]. However, there is currently no way to control the range
numerically.
Regards,
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g I need to set so that all open images will be listed
> together in the data browser?
No, the browser browses the current file.
Regards,
Yeti
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ls (for the Gaussian
filter). This is not possible as tools are only interactive. But most
of the operations have a quite direct equivalent in DataField methods.
I fixed the script so that it runs (attached).
Regards,
Yeti
import gwy
settings = gwy.gwy_app_settings_get()
settings["/modules/gr
ny control
over that.
Regards,
Yeti
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On Tue, Nov 05, 2019 at 07:32:41AM +0300, Алексей Толстокулаков via
Gwyddion-users wrote:
> Unsibscribe
To unsubscribe, send e-mail with subject ‘unsubscribe’ (not unsibscribe)
to
gwyddion-users-requ...@lists.sourceforge.net
or use the web interface.
Y
Gwyddion 2.55 is now available for download at
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Gwyddion 2.54 is now available for download at
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> height values?
I do not understand the ‘2×2’ part. Are your images just 2×2, or you
want to create some block matrix structure, or...?
Anyway, you can do
data = datafield.get_data()
to get image data as a flat list and then write it to a file in any
shape or form you wish.
Reg
ation
run by other means as I do not use MacOS...
Regards,
Yeti
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al unwindowed image was used for the FFT. It should be fixed now
(r21945). There is no workaround – you can use tomorrow's (or later)
development snapshot though.
Regards,
Yeti
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https:/
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copy of a1
> lenght and direction, whereas on the screen they are slightly different
Thanks for the bug report. You are right – the export to file/clipboard
was printing a₁'s length and angle also for a₂ by mistake. It should be
fixed now (in r21618), just in time for the upcoming version
m any
more.
> If yes, which updates might help to run the program?
Definitely not updates. Ancient MS Windows versions are going to be
less supported in new versions, not more.
Regards,
Yeti
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Please compress the file, upload it somehwere for me to download or
select a smaller one. I do not have any other e-mail.
Yeti
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,
screenshot or other information what are the correct Z values. The 3D
(= image) data import has not been tested much. So it is possible your
file is read incorrectly.
Regards,
Yeti
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rowser open to see
which image is currently selected. All functions work with the
currently selected image – if a different image is selected than you
think, surprises are bound to happen.
Regards,
Yeti
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On Tue, Aug 28, 2018 at 12:05:44PM +0200, David Nečas (Yeti) wrote:
> ...like in the attached picture.
Like this one.
Yeti
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the mask is still just sitting there.
Masks can be *used* in various function. Functions which can apply
masking show a choice like in the attached picture. When it is not
displayed, the function cannot do masking (or there is no mask present).
Regar
do is to cross-correlate one image with
> another. And then I do the mutual crop.
How are you using the cross-correlation result if you then apply Mutual
crop, which correlates and cuts the images itself? I do not understand
what you are trying to achiev
e exactly the same,
> every pixel will end up being 1, and if the two are different it should be a
> fraction.
Use Data Process → Multidata → Arithmetic with expression d1/d2 and
select the two images as d1 and d2 (they must be compatible). At least
If I understand correctly.
LANGUAGE=en_US gwyddion
switches the language to English, fix the launcher to set the
environment variable so (this is the general idea; I have no idea how
exactly it is done on a Mac).
Regards,
Yeti
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Gwyddion 2.51 is now available for download at
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On Mon, Jun 18, 2018 at 06:38:23PM +0300, Aryeh Weiss wrote:
> However, I can use Data Process>Integral Transforms>Convolution Filter.. to
> do this.
Yes, if you want to get your hands dirty, that's also an option.
Re
On Sun, Feb 11, 2018 at 04:45:12PM +0100, Rolf Wuerdemann wrote:
> Updated gwyddion to 2.50, fixed quartz installation,
> send pull request, got merged.
Great! Thanks.
Yeti
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Gwyddion 2.50 is now available for download at
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to download?
It should not be necessary, but try installing the ‘pkgconfig’ port
explicitly first. Note that, while relatively Unix literate, I do not
know much about OS X specifics.
Regards,
Yeti
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e import path. However, if Pygwy
Console does not appear in the Data Process menu check Info → Programme
Messages. There can be some information why Gwyddion thinks Python is
not available.
Regards,
Yeti
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Gwyddion 2.49 is now available for download at
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cPorts and there is no active maintainer. What I know is that if no
one is maintaining the port things will stall eventually.
So, this is not much of an answer, it is more a request for help.
Gwyddion is a project with long lifespan and maintainers of specific
ports and packages may come and go...
Regards,
Gwyddion 2.48 is now available for download at
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GS?
> Also - I am assuming this is normal but just incase it is not I get 3
> duplicate warnings on import:
> ** (:25137): WARNING **: Trying to register gtype
> 'GMountMountFlags' as enum when in fact it is of type 'GFlags'
Yes, this is ‘normal’ and we cannot do much about it because it occurs
it anyway (this would be a Gwyddion bug, but I
checked gwyshapefitpreset.c and it seems correct).
Or maybe first please try the compilation from a freshly unpacked source
code. I suspect stale files or something similar.
Regards,
Yeti
-
containing
checking for PyRun_String
You can look there, if the error message will make sense to you, or just
post the part of the file.
> Are these errors related?
Probably.
> Is the issue stemming from not finding the libpython2.7?
Not so much findin
ity in one form or another...
Regards,
Yeti
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files and directories exists and try to run the
open commands directly.
This is no magic fix, just standard getting to the core of the problem.
Regards,
Yeti
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rements (different area, different sampling step).
The way in which these PSDFs preserve Parseval's theorem is valid but
not useful.
Instead, try to figure out what exactly the software that produces PSDF
in nm⁴ does and then recalculate it to the actual density, the same as
cel that Gwyddion cannot do [better]?
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Yeti
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ial frequencies contained in the image range
from zero to the maximum frequency. The maximum frequency (outer ring
diameter) is of course clearly visible on both curves.
Regards,
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rate just the curve you see plotted you will get σ²/2.
Hope it helps,
Yeti
[*] The output of the 2D FFT module does not follow this convention,
mostly for historical reasons.
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meter was fixed to actually mean what
the documentation describes. Multiply old values by 4 to get the same
coverage.
Regards,
Yeti
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Gwyddion 2.47 is now available for download at
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Gwyddion 2.46 is now available for download at
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sed to experimenting with some interesting new
data processing methods. I wish good luck to anyone who endeavours to
implement it.
Regards,
Yeti
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improves the
software and makes it more pleasant to use, as opposed to enabling
workarounds for things that work poorly. So I am trying to understand
what goes wrong for your data.
Regards,
Yeti
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s.
As for reading, in value reading, distance, ... tools, values are
typically displayed with 4 digits (and exported with an extra one).
So you have 10-micron range data and need to read sub-nanometer
differences?
Yeti
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Che
ix it better and cross-platform it is probably going
to stay this way. Yes, you need the development Gwyddion package to run
standalone python scripts, which is an annoyance, but it is something
that can be clearly formulated and followed and things just work then.
Re
ccept it kind of makes sense (you are going to
develop with Gwyddion so you need the -dev package). The only trouble
is that (IIUC) gwy.so is in the main package. I am not sure about the
Debian policies; I would either put it to a separate package or into th
n part as a module that takes a stack of marked images and
dumps a table.
Regards,
Yeti
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r to pygwy scripts).
Regards,
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essage repeated 13 times
This is odd. No correlation module should even use
gwy_data_field_get_val().
When does the message really appear? You can keep the Program Messages
window open to see immediately when it appears.
fferences possibly remain due to rounding.
Regards,
Yeti
P.S.: The other two compatility conditions for Mutual Crop are that the
dimensions and values have the same units for both images – but I
suppose you d
method it is easy to construct
counterexamples where it does not work. Reducing the spatial
distribution to a single number is hard. So I would try to choose
(a) something that has physical meaning, i.e. it appears naturally in
other formulae you use
(b) something that correlates well with ot
uld be lost by removing it
please let me know what exactly would be lost.
Regards,
Yeti
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ht
On Sun, Jul 24, 2016 at 02:31:37PM +0200, Mathias Müller wrote:
> Yeti, before I left my lab/office in 2015 I send the sources of this
> drift correction module to you via e-mail.
> Maybe you still store it somewhere. As far as I remember you had no
> time or energy to implement/ad
s a packaging error in the MS Windows development
snapshots the last few days. It is fixed now. Please try again with
today's (2.45.20160723) or later version.
Regards,
Yeti
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What NetFlow Analyzer can do for yo
le alpha channel support (TIFF has
it in principle too but application support is shaky).
Then there is the technical issue with premultiplied alpha in Cairo vs.
non-premultiplied alpha in PNG. It is not principial though, just more
work to get the image export
positive rate for spam
classification and probably just throws away the ‘unsubscribe’
confirmation e-mails.
> Could you please help me?
I will unsubscribe you (after this mail passes through so you will still
get it)...
Re
On Mon, Jul 04, 2016 at 08:06:16AM +0200, David Nečas (Yeti) wrote:
> It is not possible now but adding such option to Fit sphere is
> definitely reasonable.
And so I did. You can test it in the development snapshots
(2.45.20160722+).
Regards,
notations is not possible in Gwyddion,
sorry. You can only do that in some graphics software after exporting
the data to an image format. SVG export is probably best for it but use
whatever suits you...
Regards,
Yeti
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ch option to Fit sphere is
definitely reasonable.
Regards,
Yeti
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single image or two subsequent images. Right?
There is the single-image Drift correction function which only attempts
to correct drift along the fast scan axis. But otherwise you are right.
Regards,
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e at University of Kiel, but I do not know if
it is publicly available – it does not seem so.
Regards,
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ave conversion tools available can also be an option
as it is supported by Gwyddion.
Regards,
Yeti
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ever implemented it separately using FFTW. There is no
implementation in Gwyddion (yet).
Regards,
Yeti
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plain vertex list.
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Mobile security can be enabling, not merely restricting. Employees who
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restrictions. Mobile Device Manager Plus allo
le is very simple and it has no currently options. So,
no. Options can be added – but ideally by someone using the VTK export.
It should be quite easiy to write a VTK file from Python directly
though. It is just a six-line text header followed
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