Re: [HCP-Users] Workbench Tutorial Data

2016-07-26 Thread Glasser, Matthew
There is a wb_command function that does this, wb_command -cifti-smoothing. We don't recommend smoothing as a general preprocessing practice however. Peace, Matt. From: Amrit Kashyap > Date: Tuesday, July 26, 2016 at 12:47 PM To: "Elam, Jennifer"

Re: [HCP-Users] Workbench Tutorial Data

2016-07-26 Thread Glasser, Matthew
Perhaps if I knew more about the analysis you are trying to do I can make more helpful suggestions. We don't generally recommend spatial smoothing or things like global signal regression which may have been done to the tutorial data. That data was generated years ago... Peace, Matt. From:

Re: [HCP-Users] Workbench Tutorial Data

2016-07-26 Thread Amrit Kashyap
Yes, I am using that because I thought that was the most processed data available. I think someone might have spatially smoothed this raw signal and then added it to the tutorial data? On Tue, Jul 26, 2016 at 11:08 AM, Glasser, Matthew wrote: > Are you using the FIX cleaned

Re: [HCP-Users] Detailed cortical areal map published in Nature and shared in BALSA

2016-07-26 Thread Magda Tsintou
Dear Demian, Thank you so much for offering your help. That would be certainly really valuable for the next steps of our project. Actually I have been working with Nikos Makris on the complete delineation of the CST focusing on the hand motor area. For our purposes and for the sake of precision

Re: [HCP-Users] Cluster Thresholding

2016-07-26 Thread Harms, Michael
And you can use PALM for a parcellated analysis as well.  That will in fact be an example during one of the “practical” sessions for the upcoming 2016 HCP Course in Boston! --  Michael Harms, Ph.D. --- Conte Center