[HCP-Users] HCP_TFMRI_scripts.zip not exist

2017-02-22 Thread redhatw
Could anyone post a correct link for the eprime scripts? I got an error of "No such file or directory (code 4)" when I trie to download it from HCP. Thanks Ze [image: Inline image 1] ___ HCP-Users mailing list HCP-Users@humanconnectome.org

[HCP-Users] PMU DICOM convertion

2017-02-22 Thread Xue, Feng
Dear folks, We have some PMU data in DICOM format, could you please let me know how I can extract PMU data from it? I tried DICOM converts such as dcm2niix and MRIConvert, none of them worked. Thanks in advance! -- Best Regards Xue, Feng Ph.D. Radiology Department University of California,

Re: [HCP-Users] dMRI after eddy but before acpc-T1W

2017-02-22 Thread Harms, Michael
All intermediate files are available via REST calls directly into the database. https://wiki.humanconnectome.org/display/PublicData/How+To+Access+Subject+D ata+via+REST cheers, -MH -- Michael Harms, Ph.D. --- Conte Center for the

Re: [HCP-Users] dMRI after eddy but before acpc-T1W

2017-02-22 Thread Philip A Cook
Thanks Matt. Szabolcs, I was looking at data I had run through the pre-processing pipeline myself. Many of the intermediate files are not distributed via ConnectomeDB. > On Feb 22, 2017, at 8:08 AM, Glasser, Matthew wrote: > > We don’t distribute the diffusion space data.

Re: [HCP-Users] HCP script for freesurfer

2017-02-22 Thread Glasser, Matthew
What kind of error? Peace, Matt. From: > on behalf of Juhyoung Ryu > Date: Tuesday, February 21, 2017 at 11:55 PM To:

Re: [HCP-Users] dMRI after eddy but before acpc-T1W

2017-02-22 Thread Glasser, Matthew
We don’t distribute the diffusion space data. Peace, Matt. From: > on behalf of Szabolcs David > Date: Wednesday, February 22, 2017 at 6:46 AM To:

Re: [HCP-Users] dMRI after eddy but before acpc-T1W

2017-02-22 Thread Szabolcs David
Hi Philip, Thank you for your email. Well I am in trouble, since in the Diffusion folder I can only see: bvals bvecs data.nii.gz grad_dev.nii.gz nodif_brain_mask.nii.gz I looked up the reference manuals (eg.: https://www.humanconnect