Re: [HCP-Users] rs-fMRI with-in subject comparison

2019-03-03 Thread Tali Weiss
i did wb_command -cifti-parcellate wb_command -cifti-convert -to-text (to be continued in matlab) 1. Where I can find the titles of each of the 360 parcels? 2. I want to classify the parcel to networks (DMN, visual...)? is there a script in HCP that do it? From:

Re: [HCP-Users] rs-fMRI with-in subject comparison

2019-03-03 Thread Glasser, Matthew
1. The HCP-YA data were not variance normalized. 2. wb_command -cifti-parcellate 3. There isn’t a good sub-cortical parcellation like the cortical parcellation yet unfortunately. If you are comparing functional connectivity across runs within a subject, you don’t need to concatenate or

Re: [HCP-Users] rs-fMRI with-in subject comparison

2019-03-03 Thread Tali Weiss
Thank you Mattew! 1. Download Packages: State fMRI FIX-Denoised (Compact) {Subject}_REST/MNINonLinear/Results/{fMRIName}/{fMRIName}_Atlas_MSMAll_hp2000_clean.dtseries.nii - The raw data were zscore (overall standard deviation) and then cleaned by sICA+FIX? - In wb there is a layer: .dynconn.nii.