Re: [HCP-Users] FIX denoised 3T task data release?

2018-09-19 Thread Glasser, Matthew
We do plan to release denoised 3T task data, but I don¹t have a time-table on that. We didn¹t specifically make a 59k version of the parcellation, but that is easy to create with wb_command -cifti-resample and the appropriate spheres + vertex area maps. Matt. On 9/19/18, 2:08 PM,

[HCP-Users] FIX denoised 3T task data release?

2018-09-19 Thread Shankar Tumati
Hello, We were implementing the hcp_fix_multi_run script on the HCP 3T task data. Although the script is running, it is resource intensive. It seemed from a previous thread that FIX was implemented on the task data: https://www.mail-archive.com/hcp-users@humanconnectome.org/msg06605.html I

Re: [HCP-Users] FIX-denoised

2015-12-10 Thread Joelle Zimmermann
st...@fmrib.ox.ac.uk> > Date: Thursday, December 10, 2015 at 3:43 AM > To: Maarten Mennes <mennes.maar...@gmail.com> > Cc: Matt Glasser <glass...@wustl.edu>, Greg Burgess <gcburg...@gmail.com>, > "hcp-users@humanconnectome.org" <hcp-users@humanconnectome.org&

Re: [HCP-Users] FIX-denoised

2015-12-10 Thread Stephen Smith
; > >> On Wed, Dec 9, 2015 at 11:10 PM, Harms, Michael <mha...@wustl.edu > >> <mailto:mha...@wustl.edu>> > >>wrote: > >> > >> See inline below. > >> > >> -- > >> Michael Harms, Ph.D. > >> ---

Re: [HCP-Users] FIX-denoised

2015-12-10 Thread Glasser, Matthew
cp-users@humanconnectome.org<mailto:hcp-users@humanconnectome.org>> Subject: Re: [HCP-Users] FIX-denoised Hi Everyone, Thank you all for your very helpful feedback. So, just to summarize on the consensus, and please correct me if I am wrong: ICA+FIX denoising presumably already removes

Re: [HCP-Users] FIX-denoised

2015-12-10 Thread Glasser, Matthew
;mailto:gcburg...@gmail.com>>, "hcp-users@humanconnectome.org<mailto:hcp-users@humanconnectome.org>" <hcp-users@humanconnectome.org<mailto:hcp-users@humanconnectome.org>> Subject: Re: [HCP-Users] FIX-denoised Hi all I think Greg was making the valid poi

[HCP-Users] FIX-denoised

2015-12-09 Thread Joelle Zimmermann
Hi everyone, I'm interested in using the FIX-denoised data, and am currently looking at the extended package, as I'm interested in the volumetric data. I'm wondering whether the motion parameters have already been regressed out from the FIX denoised rfMRI_REST1_LR_hp2000_clean.nii.gz? I'm

Re: [HCP-Users] FIX-denoised

2015-12-09 Thread Joelle Zimmermann
edu > > From: Joelle Zimmermann <joelle.t.zimmerm...@gmail.com> > Date: Wednesday, December 9, 2015 1:26 PM > To: "hcp-users@humanconnectome.org" <hcp-users@humanconnectome.org> > Subject: [HCP-Users] FIX-denoised > > Hi everyone, > > I'm i

Re: [HCP-Users] FIX-denoised

2015-12-09 Thread Maarten Mennes
To: "Harms, Michael" <mha...@wustl.edu> > Cc: "hcp-users@humanconnectome.org" <hcp-users@humanconnectome.org> > Subject: Re: [HCP-Users] FIX-denoised > > Hi Michael, > > Thanks for your help. I have a few more questions below.. > > Has an averag

Re: [HCP-Users] FIX-denoised

2015-12-09 Thread Harms, Michael
, MO  63110 Email: mha...@wustl.edu From: Joelle Zimmermann <joelle.t.zimmerm...@gmail.com> Date: Wednesday, December 9, 2015 3:08 PM To: "Harms, Michael" <mha...@wustl.edu> Cc: "hcp-users@humanconnectome.org" <hcp-users@humanconnectome.org> Subject

Re: [HCP-Users] FIX-denoised

2015-12-09 Thread Harms, Michael
. Louis, MO  63110 Email: mha...@wustl.edu From: Joelle Zimmermann <joelle.t.zimmerm...@gmail.com> Date: Wednesday, December 9, 2015 1:26 PM To: "hcp-users@humanconnectome.org" <hcp-users@humanconnectome.org> Subject: [HCP-Users] FIX-denoised Hi everyone, I'm inter