Re: [HCP-Users] How can the diffusion HCP data be registered to the MNI space?

2019-02-12 Thread Glasser, Matthew
Yes. Sent from my Verizon, Samsung Galaxy smartphone Original message From: Yael Shavit Date: 2/12/19 8:18 AM (GMT-06:00) To: "Glasser, Matthew" Cc: hcp-users , NEUROSCIENCE tim Subject: Re: [HCP-Users] How can the diffusion HCP data be registered to the MNI sp

Re: [HCP-Users] How can the diffusion HCP data be registered to the MNI space?

2019-02-12 Thread Glasser, Matthew
to:hcp-users@humanconnectome.org>>, Timothy Coalson mailto:tsc...@mst.edu>> Subject: Re: [HCP-Users] How can the diffusion HCP data be registered to the MNI space? Thanks. Another question -are individual mesh surfaces comparable across subjects? בתאריך יום ד׳, 30 בינו׳ 2019, 1:34, מאת Glasse

Re: [HCP-Users] How can the diffusion HCP data be registered to the MNI space?

2019-01-29 Thread Glasser, Matthew
g>>, Timothy Coalson mailto:tsc...@mst.edu>> Subject: Re: [HCP-Users] How can the diffusion HCP data be registered to the MNI space? Only cortex for now, but we're still looking into the option of working on the sub-cortex as well in the future. So I would be happy to hear your opinion o

Re: [HCP-Users] How can the diffusion HCP data be registered to the MNI space?

2019-01-29 Thread Yael Shavit
ical also? > > Matt. > > From: Yael Shavit > Date: Monday, January 28, 2019 at 1:55 AM > To: Matt Glasser > Cc: hcp-users , Timothy Coalson < > tsc...@mst.edu> > Subject: Re: [HCP-Users] How can the diffusion HCP data be registered to > the MNI space? > > I

Re: [HCP-Users] How can the diffusion HCP data be registered to the MNI space?

2019-01-28 Thread Yael Shavit
thy > Coalson > Date: Thursday, January 17, 2019 at 12:57 PM > To: Yael Shavit > Cc: hcp-users > Subject: Re: [HCP-Users] How can the diffusion HCP data be registered to > the MNI space? > > The strongest directional information in the diffusion data is in the > white ma

Re: [HCP-Users] How can the diffusion HCP data be registered to the MNI space?

2019-01-28 Thread Yael Shavit
; > Matt. > > From: Yael Shavit > Date: Sunday, January 27, 2019 at 2:39 AM > To: hcp-users > Cc: Timothy Coalson , Matt Glasser > Subject: Re: [HCP-Users] How can the diffusion HCP data be registered to > the MNI space? > > Hi, thank you for your answers. My issue

Re: [HCP-Users] How can the diffusion HCP data be registered to the MNI space?

2019-01-28 Thread Glasser, Matthew
t;> Subject: Re: [HCP-Users] How can the diffusion HCP data be registered to the MNI space? I would like to compare diffusion properties of grey matter areas across subjects. I was wondering whether projecting them to individual native surfaces as they are would allowing comparing them

Re: [HCP-Users] How can the diffusion HCP data be registered to the MNI space?

2019-01-27 Thread Glasser, Matthew
-users mailto:hcp-users@humanconnectome.org>> Cc: Timothy Coalson mailto:tsc...@mst.edu>>, Matt Glasser mailto:glass...@wustl.edu>> Subject: Re: [HCP-Users] How can the diffusion HCP data be registered to the MNI space? Hi, thank you for your answers. My issue is not specifically wit

Re: [HCP-Users] How can the diffusion HCP data be registered to the MNI space?

2019-01-17 Thread Glasser, Matthew
> Cc: hcp-users mailto:hcp-users@humanconnectome.org>> Subject: Re: [HCP-Users] How can the diffusion HCP data be registered to the MNI space? The strongest directional information in the diffusion data is in the white matter, so I assume you are computing some measure from the scans and specif

Re: [HCP-Users] How can the diffusion HCP data be registered to the MNI space?

2019-01-17 Thread Timothy Coalson
The strongest directional information in the diffusion data is in the white matter, so I assume you are computing some measure from the scans and specifically want to study its value only in gray matter? The main command for this purpose is wb_command -volume-to-surface-mapping, and we recommend

[HCP-Users] How can the diffusion HCP data be registered to the MNI space?

2019-01-17 Thread Yael Shavit
It seems that the diffusion HCP data is in native space in a resolution of 1.25mm^3. I am interested in projecting it to surface, in 2mm^3. What would be the best way to do so, preferably using the HCP Pipelines? Thank you in advance. Yael Shavit Tel Aviv University