Re: [HCP-Users] help: extract MNI coordinates of tfMRI blobs from workbench

2017-08-17 Thread Glasser, Matthew
Nope, you can do the tractography directly from the surfaces using FSL: https://fsl.fmrib.ox.ac.uk/fsl/fslwiki/FDT/UserGuide#Using_surfaces Use the surfaces in ${StudyFolder}/${Subject}/T1w/fsaverage_LR32k. White surfaces are good for counting and pial surfaces are good for stopping. There

[HCP-Users] help: extract MNI coordinates of tfMRI blobs from workbench

2017-08-17 Thread Yin Wang
Dear HCP team, We are interested in using both task fMRI and diffusion MRI data to study white matter pathways between functional cortical regions. We are planning to use task fMRI activation to define several ROIs as seeds for dMRI tractography. We have several questions below and hope someone