Re: [HCP-Users] seeking a dataset for research

2018-09-18 Thread Elam, Jennifer
Hi Givon, HCP data is MRI and MEG-based neuroimaging data at the resolution of millimeters of brain volume and surfaces rather than at neuronal resolution. Perhaps others on the list are aware of datasets with the information you are seeking. Best, Jenn Jennifer Elam, Ph.D. Scientific

Re: [HCP-Users] Detailed manual rating score of structural images

2019-01-22 Thread Elam, Jennifer
Hi Xuhong, All of the structural data released by HCP is of good or excellent quality (scores of 3-4 on our QC scale). We have not publicly released the exact ratings for released subjects. The file you are referring to is on our non-public wiki and is referred to as an example in the SOP for

Re: [HCP-Users] TR : tutorial: resting state fMRI Scene is not working well with Connectome Workbench 1.3.2

2019-04-02 Thread Elam, Jennifer
Hi Vanessa, Sorry that the Charting Dense Timeseries section of the Scene 4 section of the Workbench Tutorial is not working. There was a major update to charting features in wb_view with the release of WB v1.3.0+. Due to other priorities we have not updated the WB Tutorial to incorporate

Re: [HCP-Users] Connectome workbench download security certificate

2019-03-27 Thread Elam, Jennifer
Euclid Avenue St. Louis, MO 63110 314-362-9387 e...@wustl.edu<mailto:e...@wustl.edu> www.humanconnectome.org<http://www.humanconnectome.org/> From: hcp-users-boun...@humanconnectome.org on behalf of Elam, Jennifer Sent: Wednesday, March 27, 2019

Re: [HCP-Users] Connectome workbench download security certificate

2019-03-27 Thread Elam, Jennifer
Thanks Tom, we'll look into it and let you know when things are back up. Best, Jenn Jennifer Elam, Ph.D. Scientific Outreach, Human Connectome Project Washington University School of Medicine Department of Neuroscience, Box 8108 660 South Euclid Avenue St. Louis, MO 63110 314-362-9387

[HCP-Users] Become an HCP Pipelines pro at HCP Course 2019!

2019-04-08 Thread Elam, Jennifer
Want to apply tools created by HCP experts to your own neuroimaging data? Always wanted to try the HCP Pipelines, but haven't had the time to test them out? This year's HCP Course July 8 – 12, 2019 in Portland, Oregon is featuring expanded, hands-on sessions to help you discover and use HCP

Re: [HCP-Users] A few questions about HCP behavioral data

2019-02-27 Thread Elam, Jennifer
Hi Xinyang, Mattis, and Kristina, Item Response Theory (IRT) was used to score the HCP Toolbox data, but this was done completely internally by the NIH Toolbox processing team and we don't have any other details beyond what is described in the NIH Toolbox Scoring and Interpretation Guide from

[HCP-Users] HCP Course 2019: Get ready for more data, and a new way of getting it

2019-03-04 Thread Elam, Jennifer
More HCP data are comingand will be released in a new way.will you be ready? This spring, the first data from the Lifespan Human Connectome Projects - (HCP) Development (healthy subjects ages 5-21) and HCP Aging (ages 36-100+) will be publicly released. Yay! Also, for the first time,

[HCP-Users] HCP pipelines v4.0.0 released!

2019-03-18 Thread Elam, Jennifer
We are very happy to announce the release of v4.0.0 of the HCP pipelines!!! Notable changes and features of v4.0.0 * First supported release of multi-run FIX (MR-FIX) *

Re: [HCP-Users] HCP pipelines v4.0.0 released!

2019-03-18 Thread Elam, Jennifer
Box 8108 660 South Euclid Avenue St. Louis, MO 63110 314-362-9387 e...@wustl.edu<mailto:e...@wustl.edu> www.humanconnectome.org<http://www.humanconnectome.org/> From: hcp-users-boun...@humanconnectome.org on behalf of Elam, Jennifer Sent: Monday, Marc

Re: [HCP-Users] Request for DTIV1_to_Workbench.sh

2019-02-07 Thread Elam, Jennifer
Hi Sally, Thanks for pointing us to the earlier message to the list with the script. I'll forward it to you with the attachments off the list and add it to our wiki for others to get if they need it. Best, Jenn Jennifer Elam, Ph.D. Scientific Outreach, Human Connectome Project Washington

Re: [HCP-Users] Sharing HCP-derived brain networks and graph-theoric measures

2019-02-08 Thread Elam, Jennifer
Caio Seguin; Elam, Jennifer; hcp-users Subject: Re: [HCP-Users] Sharing HCP-derived brain networks and graph-theoric measures The "Upload Files" button on the Files modal should take you to a page with a widget that allows you to upload arbitrary files to your BALSA study. It is as

Re: [HCP-Users] Inter-scan intervall of retst dataset

2019-01-25 Thread Elam, Jennifer
Hi Marlene, See https://wiki.humanconnectome.org/display/PublicData/Interval+between+Test+and+Retest+Visits+for+HCP+Retest+Subjects Interval between Test and Retest Visits for HCP Retest Subjects - Connectome Data Public - HCP Wiki - Human Connectome

Re: [HCP-Users] volumetric segmentation of subcortical structures

2019-05-16 Thread Elam, Jennifer
Hi Cecelia, Did you sign the data Use Terms when you logged into ConnectomeDB after creating an account? If not, click the "Data Use Terms Required" button and sign the terms: [cid:e7cb7ff5-f8e5-478a-860e-3f22d19abde1] After that, click Open Dataset and it will take you to

Re: [HCP-Users] Item data for NIH Emotion battery

2019-05-30 Thread Elam, Jennifer
Hi Leonardo, Do you mean the NIH Toolbox Emotion domain? I can send you the TB data as a spreadsheet off list. Best, Jenn Jennifer Elam, Ph.D. Scientific Outreach, Human Connectome Project Washington University School of Medicine Department of Neuroscience, Box 8108 660 South Euclid Avenue

Re: [HCP-Users] problems to download the example data to run HCP Pipelines and NHPPipelines

2019-06-18 Thread Elam, Jennifer
This has got to be a link from the Github Pipelines, right Vanessa? Jenn Jennifer Elam, Ph.D. Scientific Outreach, Human Connectome Project Washington University School of Medicine Department of Neuroscience, Box 8108 660 South Euclid Avenue St. Louis, MO 63110 314-362-9387

[HCP-Users] Last weeks to register for HCP Course 2019!

2019-06-08 Thread Elam, Jennifer
Reminder that it's the last few weeks to register for this year's HCP Course July 8 – 12, 2019 in beautiful, cool Portland, Oregon. We have room for you! Don't delay, our hotel booking deadline is one week from today, Saturday June 15. Check out the updated HCP Course schedule and faculty

[HCP-Users] Announcing HCP Lifespan Aging and Development Release 1.0!

2019-05-21 Thread Elam, Jennifer
Announcing the first data release from the Lifespan Human Connectome Projects on the NIMH Data Archive (NDA)! Data from two studies of healthy individuals are now available to

Re: [HCP-Users] coding of videos in social task?

2019-04-30 Thread Elam, Jennifer
Hi David, The A and B versions allowed for tasks to be rerun on a subject who had an issue with their "A" run without running the exact same version of the task (which would bias the subject's responses). CCing Greg Burgess who can answer the question about the random condition. Best, Jenn

Re: [HCP-Users] Query regarding PSQI 'Other' scores

2019-05-01 Thread Elam, Jennifer
Hi Nicole, Yes, we do have information that subjects provided in an open field (5j. Describe: ) for PSQI 5.During the past month, how often have you had trouble sleeping because of... (j) Other reason(s), as described in 5j. pt2 0=Not during the past month, 1=Less than once a week, 2=Once or

Re: [HCP-Users] Eye tracking data for 3T scans?

2019-04-19 Thread Elam, Jennifer
Hi Nicola, Yes, you are correct, we did not collect and release eye tracker data for 3T for HCP-Young Adult. Best, Jenn Jennifer Elam, Ph.D. Scientific Outreach, Human Connectome Project Washington University School of Medicine Department of Neuroscience, Box 8108 660 South Euclid Avenue St.

Re: [HCP-Users] BedpostX for 7T Diffusion data

2019-04-26 Thread Elam, Jennifer
Hi Kamal, No, we have not released bedpostX processed 7T diffusion data on HCP Young Adult subjects due to competing priorities, such as the advent of the Lifespan HCP-Development and HCP-Aging projects. Best, Jenn Jennifer Elam, Ph.D. Scientific Outreach, Human Connectome Project

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