Re: [HCP-Users] Converting FA maps to CIFTI

2016-01-31 Thread Timothy Coalson
That was meant to say "take the part of your measures that is in grey matter". Tim On Feb 1, 2016 7:45 AM, "Timothy Coalson" wrote: > So, you can make cifti files that contain white matter, but they won't > match up to our grey matter cifti files. If you want to take the past

Re: [HCP-Users] Converting FA maps to CIFTI

2016-01-31 Thread Stephen Smith
Hi - so you have estimated in FA, MD, etc in grey matter? Note that CIFTI doesn't cover white matter. Cheers. > On 1 Feb 2016, at 06:01, Georg Kerbler wrote: > > Hi, > > I would like to convert FA/MD/AD/etc. images which I calculated in T1w space, > into CIFTI's, in

Re: [HCP-Users] Converting FA maps to CIFTI

2016-01-31 Thread Timothy Coalson
So, you can make cifti files that contain white matter, but they won't match up to our grey matter cifti files. If you want to take the past of your measures that is in grey matter and put that into cifti, you first need to use -volume-to-surface-mapping for both hemispheres, then you can use