[HCP-Users] Converting the huge dense connectome to a csv

2015-11-13 Thread Rose Tharail John
Hi all, I am attempting to use the Group average functional connectivity matrix (“dense” functional connectome, the grayordinate × grayordinate full correlation matrix). Firstly I must convert it from the .nii format to the csv. I tried the MATLAB way, but could not succeed. So I decided to use

Re: [HCP-Users] Converting the huge dense connectome to a csv

2015-11-13 Thread Timothy Coalson
The only thing -cifti-convert generally tries to preserve is the data matrix, all the header info is not retained, and to convert it back, most formats require a template cifti file that has the appropriate header info. You can get the relevant header info with the -cifti-export-dense-mapping