Re: [HCP-Users] combining cortical and subcortical parcellations

Hi Tim, Thanks for the reply. Yep, I was trying to use label-modify-keys on a cifiti file, so that explains it. Cheers, Aaron On Tue, May 22, 2018 at 6:28 AM, Timothy Coalson wrote: > Oh, I have a guess as to what you encountered: the -label-modify-keys > command is only for

Re: [HCP-Users] combining cortical and subcortical parcellations

Oh, I have a guess as to what you encountered: the -label-modify-keys command is only for gifti label files, not cifti, so it probably told you something like "parse error on line 1". It looks like I didn't implement equivalents for other formats, probably related to the fact that label tables

Re: [HCP-Users] combining cortical and subcortical parcellations

I think you must be using an older version of workbench, the recent 1.3.0 release appears to do those commands correctly. Do "wb_command -version" to check. I'll take a look at the -label-modify-keys command, can you be more specific about what it did? Note that Neurodebian has not yet updated

Re: [HCP-Users] combining cortical and subcortical parcellations

Never mind, I managed to figure it out. The command label-modify-keys doesn't seem to work however, which makes fixing the key values a bit more cumbersome. Cheers, Aaron On Sun, May 20, 2018 at 12:21 AM, Aaron R wrote: > I've attempted to combine cortical and subcortical