Bob Hanson wrote:
...
b) What WOULD you use if you had it available?
the monitor/measure command, especially if there is no need for atom
numbers but select expressions could be used
Hmm. Usually for those you need an ordered list, right? But one could
imagine following the bonding in
Could someone point me to a description of the pdb file format?
*
Jeff Hansen
Department of Chemistry
DePauw University
Greencastle, IN 46135
[EMAIL PROTECTED]
*
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Bob Hanson wrote:
Jan wrote:
I don't see a difference whether I say
monitor 2087 2088
or
monitor ([LIP]3:A.O5) ([LIP]3:A.O6)
Oh, sure. OK. I don't know that we are headed that way wth the monitor
command, because there are some programming issues with putting two
atom expressions in the
The official (maybe not the best):
http://www.pdb.org/pdb/file_formats/pdb/pdbguide2.2/guide2.2_frame.htm
l
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Jan wrote:
we already have
monitor 111 112 113
why not
getProperty(measure,[LIP]3:A.O5,[LIP]3:A.O6,[LIP]3:A.O7)
sure, we'll do something like this.
a monitoring function on your callback.htm
monitor: measurementsChange
works for me, but I miss the corresponding e.g. monitor 1 2 3
Bob Hanson wrote:
...
I use callbacks in RasMol to query e.g. which amino acids are in 3.2
A distance to a hetero component
(echo load pdb inline\nselect within(3.2, [LIP]3) and not
[LIP]3\nshow selected group\nexit\n;cut 1imb.pdb) | rasmol
-nodisplay | evaluateMakeRasMolScriptFromIt.pl
AS A USER, WHAT DO YOU WANT?
a) Do you implement callbacks? If so, which ones?
I implement the animFrameCallback to help coordinate other JavaScript
things I like to show simultaneously with some animations.
b) What WOULD you use if you had it available?
I can't think of other callbacks that I'd
I'm quite eager to have a simple version of this functionality. Thanks!
a) Do you implement callbacks? If so, which ones?
No, though I'd like to (once I understood how it works -- your mechanism I
think I understand already!)
b) What WOULD you use if you had it available?
I want to know
On Feb 9, 2006, at 11:33 PM, [EMAIL PROTECTED] wrote:Message: 4 Date: Thu, 09 Feb 2006 13:07:47 -0600 From: Bob Hanson [EMAIL PROTECTED] To: jmol-users@lists.sourceforge.net Subject: [Jmol-users] applet -- callback brainstorming Reply-To: jmol-users@lists.sourceforge.net I'm looking at the Jmol
On Feb 10, 2006, at 1:58 PM, [EMAIL PROTECTED] wrote:I don't see a difference whether I say monitor 2087 2088 or monitor ([LIP]3:A.O5) ([LIP]3:A.O6) Oh, sure. OK. I don't know that we are headed that way wth the monitor command, because there are some programming issues with putting two atom
I'm sad that both, RasMol and Jmol didn't support the PDB
format completely e.g. ^insCode versus ;altLoc
but I count on you and Jmol which is evolving and will make it some day,
and is relay a great applet.
)
Regards, Jan
Jan,
As you know that I have tried several times to add altLoc
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