Hi there,
Is is possible that Jmol is ignoring the command jmolScript(animation
mode LOOP); ?
I have a piece of code like this:
jmolScript(animation mode LOOP);
jmolScript(animation fps 5);
jmolButton(anim on, Animate);
jmolButton(anim off, Stop);
And when I click on Animate it only animates
Carles, please specify which version of Jmol you are using.
On 11.1.29 applet it works (see e.g.
http://biomodel.uah.es/Jmol/multimodel/11-1.htm
On 11.4.RC1 application it also works
-
Check out the new SourceForge.net
It's 11.2.14, the last stable version I downloaded from jmol.sf.net
some days ago
Thanks
El 14/01/2008, a las 18:16, Angel Herraez escribió:
Carles, please specify which version of Jmol you are using.
On 11.1.29 applet it works (see e.g.
http://biomodel.uah.es/Jmol/multimodel/11-1.htm
Definitely bugs. Please file a bug report.
I love the fact that you can name an echo, display it, then operate
on a second named echo without affecting the first. This is a super
feature!
However:
The following invalid argument results appear to me to be bugs in
set echo, in Jmol applet
So, Eric, I think by setting a variable to the contents of an spt file,
you could even select out segments you want to execute. (The simple way to
do this would be to set up a script file with functions and then only run
the functions that you specify.) For that the load(filename) Jmol math
I think some sort of translateSelected might be what you need.
Hello everyone!
I now am trying to display 3 proteins in a figures.
For example, I have 3 proteins, 1XBL.pdb, 1DKG.pdb, and 1DKX.pdb.
What I want to do is I want to display this 3 protein structures at same
time, and some
More testing:
Instead of loading some residues at once and then painting all of
them, I changed the script to select each residue individually and
then change its colour;
select C1; color [0,0,0];
select N2; color [0,0,0];
select C3; color [0,0,0];
...
select N100; color [0,10,0];
Try checking frame 2 instead of frame 1.
Before loading the file, try
set loglevel 5
Then load the file and look in the Java console. You should see
information about what frames the orbitals are in and how many there are.
Gaussian output, for example, puts the MOs in frame 2.
Bob Hanson
I installed the very nice slab slider available from
http://wiki.jmol.org:81/index.php/Recycling_Corner#Slider_control_for_Slabbing
in my Jmol Tutorial-Authoring Template (JTAT).
I have now adapted it to control either zoom or slab.
I would like the zoom slider to auto-slide to match the
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