Re: [Jmol-users] color temperature relative to each protein loaded

2011-04-04 Thread Daniel Carbajo
Ops I missed it in the documentation, it works perfectly indeed. But I am not able to specify the 0.0-8.0 range when mapping the property temperature into an isosurface... I made the following working code without specifying any range: jmolScriptWait(frame none; isosurface SAS_3.1 select {3.1}

Re: [Jmol-users] color temperature relative to each protein loaded

2011-04-04 Thread Robert Hanson
try putting the COLOR ABSOLUTE business before the PROPERTY word. isosurface ID SAS_3.1 select {3.1} sasurface 1.2 map color absolute 0.0 8.0 property temperature colorscheme user; Also, you can do this later for an existing isosurface using color isosurface user range 0.0 8.0 or color

Re: [Jmol-users] jmolResizeApplet() behaves strangely in Firefox

2011-04-04 Thread Angel Herráez
Hello Yingjie I don't understand what is exactly the problem you are seeing. Your page works well in my Windows Firefox 3.6 There is an alternative: you can put jmolApplet inside a DIV and then resize that div rather than the applet div id=jmolContainer script jmolApplet(100%) /script /div

Re: [Jmol-users] show measurements as echo

2011-04-04 Thread Daniel Carbajo
At last I made the crossMeasure function work! All this time spent and the only problem was a couple of additional curly brackets I was not writing!!! So the functions look like this: function crossMeasure(atomListN, atomListM){ set measurementUnits angstroms set measurements 3 font

Re: [Jmol-users] show measurements as echo

2011-04-04 Thread Robert Hanson
ah--- right! Good sleuthing. On Mon, Apr 4, 2011 at 8:49 AM, Daniel Carbajo daniel.carb...@gmail.comwrote: At last I made the crossMeasure function work! All this time spent and the only problem was a couple of additional curly brackets I was not writing!!! So the functions look like this: