Re: [Jmol-users] (no subject)

Ron, the question is: who would run the Javascript? There is no JS interpreter if you are not in a webpage -- CenturyLink Cloud: The Leader in Enterprise Cloud Services. Learn Why More Businesses Are Choosing

Re: [Jmol-users] Where's my ATP?

Jaim, I think ths may be what you need, picking up the older definition of ligand: http://wiki.jmol.org/index.php/AtomSets ligand: The new definition (Jmol 12.2) includes atoms that do not belong to protein, nucleic or solvent. That includes water, other solvent, ions and

Re: [Jmol-users] Tinker xyz files as Jmol input

Angel, Thanks. For the record, Jmol rejects the file as output by Tinker (no cut ad paste involved). Quite oddly, based on your recount of the pdb spec, simply removing the SOURCE line does make it partially digestible; although this is without proper identification of atom types. As Bob

Re: [Jmol-users] Tinker xyz files as Jmol input

George, Glad you managed to build a solution Funny enough, a quick Google search gave me this 1997 very same problem and answer: http://www.ccl.net/chemistry/resources/messages/1997/11/27.006-dir/index.h tml :) --