Dear colleagues,

My co-authors and I are pleased to share with you our publication
describing a molecular assay able to detect Cuvier’s beaked whale’s DNA
traces:



Boldrocchi G, Conte L, Galli P, Bettinetti R and Valsecchi E 2024. “Cuvier's
beaked whale (*Ziphius cavirostris*) detection through surface-sourced
eDNA: a promising approach for monitoring deep-diving cetaceans”. Ecological
Indicators 161, 111966 https://doi.org/10.1016/j.ecolind.2024.111966



Abstract

Among cetaceans, the Cuvier’s beaked whale is considered an extreme diver,
thus not one of the easiest cetacean species to be studied due to its
elusive behaviour and a preference for deep offshore waters. Although
dedicated cetacean surveys have increased our knowledge on the distribution
of Cuvier’s beaked whales in the Mediterranean Sea, knowledge gaps still
remain where the study effort is non-existent. In this context, the use of
new molecular methodologies capable of intercepting small traces of DNA
left in the environment (eDNA) by marine organisms represents a valid
approach to infer species’ occurrence. Moreover, the collection of water
from the superficial layer is suitable for targeting marine mammals, as the
constraints imposed by their nature implies periodic and frequent surfacing
in order to breathe, releasing exhalants rich in their epithelial cells.
Therefore, we designed and tested a taxon-specific primer set to infer
Cuvier’s beaked whale presence, with the aims of 1) examining the
effectiveness of the eDNA technique to detect the presence of a deep-diving
cetacean in open waters, using the Cuvier’s beaked whale as case study; 2)
providing data on the occurrence of this species within the Canyon of
Caprera over a six-months study period and 3) assessing the species
presence in adjacent waters in the central northern Mediterranean Sea based
on the analysis of samples collected in a Citizen Science campaign. Results
from this study demonstrated that superficial waters may retain biological
traces of this cetacean despite the fact that it mostly inhabits deep
waters. Specifically, this study provides evidence of the regular presence
of Cuvier’s beaked whale in the Canyon of Caprera, with a preference for
bathymetry in the range of 700–1000 m. Molecular traces’ distribution
suggests a potential inshore movement of this species during Fall, which
might be related to migration of its cephalopod prey or a shift in prey
preferences, although this aspect requires further investigation. Overall,
this study showed that stronger positive signals were recorded in sampling
stations located on surfaces above submarine canyon systems, demonstrating
the importance of these areas as elective habitats for the Cuvier’s beaked
whale, thus the pivotal priority to their conservation.



You can find the open-access article at this link:
https://www.sciencedirect.com/science/article/pii/S1470160X24004230



Best wishes





Elena Valsecchi
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