[Matplotlib-users] xlabels / ylabels as (non-math) text for pstoedit

2009-06-14 Thread Sebastian Busch
Hey everyone,

this is more a how-to / feature request than a question... Normally, my
workflow for embedding images in LaTeX is as follows:

1) produce ps-file
2) use pstoedit (xfig) to separate text/math (LaTeX-typesettable) from
the image
3) save as pdf_t and pdf, respectively
4) \input this in the LaTeX document -- pdflatex will then set the text
at every compilation.

This has the advantage that I can change fonts etc without having to
redo all the figures.


I was trying to do so with matplotlib 0.98.3 and pstoedit 3.45 on a
64bit Ubuntu 8.10. I followed the instructions in the matplotlib
cookbook but kept experiencing problems when calling pstoedit [1], the
xlabels and ylabels were somehow converted to Courier but not put in the
text part, . would become : and so on.

Solution brought this thread
http://www.nabble.com/Switching-between-different-font-settings-ts21279388.html
which suggested using OldScalarFormatter (thanks at this point also from
my side, Jouni) -- which works, see attached example.


So much for the how-to-part -- obviously, my suggestion is now to not
force users to have math-labels. I have to admit that I am not aware of
the drawbacks of OldScalarFormatter, but alone the name makes me think
that it might be not the best solution...


Thanks and best regards,
Sebastian.

P.S.: why actually does
ax.yaxis.get_ticklabels()[1].get_text()
return an empty string when called before savefig?

P.P.S.: I expect to be offline several days, so please excuse me if I
won't be answering timely.


[1]
pstoedit: version 3.45 / DLL interface 108 (build Jun 17 2008 - release
build - g++ 4.3.1) : Copyright (C) 1993 - 2007 Wolfgang Glunz
Warning: Level 2 version of image and imagemask not supported for this
backend (due to lack of support for bitmaps on intermediate files)
Warning, unsupported font YBFHZA+CMR12, using Courier instead.
Warning, unsupported font YBFHZA+CMR12, using Courier instead.
Warning, unsupported font YBFHZA+CMR12, using Courier instead.
Warning, unsupported font YBFHZA+CMR12, using Courier instead.
Warning, unsupported font YBFHZA+CMR12, using Courier instead.
Warning, unsupported font YBFHZA+CMR12, using Courier instead.
Warning, unsupported font YBFHZA+CMR12, using Courier instead.
Warning, unsupported font YBFHZA+CMR12, using Courier instead.
Warning, unsupported font YBFHZA+CMR12, using Courier instead.
Warning, unsupported font YBFHZA+CMR12, using Courier instead.
Warning, unsupported font MCSZLR+CMMI12, using Courier instead.
Warning, unsupported font YBFHZA+CMR12, using Courier instead.
Warning, unsupported font YBFHZA+CMR12, using Courier instead.
Warning, unsupported font MCSZLR+CMMI12, using Courier instead.
Warning, unsupported font YBFHZA+CMR12, using Courier instead.
Warning, unsupported font YBFHZA+CMR12, using Courier instead.
Warning, unsupported font MCSZLR+CMMI12, using Courier instead.
Warning, unsupported font YBFHZA+CMR12, using Courier instead.
Warning, unsupported font YBFHZA+CMR12, using Courier instead.
Warning, unsupported font MCSZLR+CMMI12, using Courier instead.
Warning, unsupported font YBFHZA+CMR12, using Courier instead.
Warning, unsupported font YBFHZA+CMR12, using Courier instead.
Warning, unsupported font MCSZLR+CMMI12, using Courier instead.
Warning, unsupported font YBFHZA+CMR12, using Courier instead.
from matplotlib import rcParams
params = {'backend': 'ps',
  'ps.usedistiller': 'xpdf',
  'text.usetex': True,
  }
rcParams.update(params)
from matplotlib.ticker import OldScalarFormatter
import pylab
from pylab import arange,pi,sin,cos,sqrt

# Generate data
x = pylab.arange(-2*pi,2*pi,0.01)
y1 = sin(x)
y2 = cos(x)

# Plot data
pylab.figure(1)
pylab.clf()
pylab.axes([0.125,0.2,0.95-0.125,0.95-0.2])
pylab.plot(x,y1,'g:',label='1sin(x)')
pylab.plot(x,y2,'-b',label='cos(x)')

pylab.xlabel('x (radians)')
pylab.ylabel('y')
pylab.legend()

ax = pylab.gca()
ax.xaxis.set_major_formatter(OldScalarFormatter())
ax.yaxis.set_major_formatter(OldScalarFormatter())

pylab.savefig('tex_demo.ps')



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[Matplotlib-users] matplotlib 0.98.5.3 windows binaries available

2009-06-14 Thread John Hunter
The windows binaries for the latest matplotlib release are now
available for download at

  https://sourceforge.net/project/showfiles.php?group_id=80706package_id=278194

for python2.5 and 2.6 (if you need 2.4 please respond here).  Sorry
for the delay, but we hit a nasty python2.6/libpng/mingw that held us
up.  Thanks to Christoph Gohlke
for the visual studio builds and Charlie Moad for the MingW framework.

Please let us know if you have any troubles.

JDH

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Re: [Matplotlib-users] Python 2.6.2 installation?

2009-06-14 Thread John Hunter
On Fri, Jun 12, 2009 at 6:44 PM, Christoph Gohlkecgoh...@uci.edu wrote:
 Here are the Windows installer and egg produced by setup.py bdist_wininst
 respectively setupegg.py bdist_egg:


Thanks Christoph -- I've uploaded these to the sf site.  After the
next trunk release, I may ask you again to provide some visual studio
builds if you have the time, since the mingw/python2.6 problems have
not been solved yet.

JDH

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[Matplotlib-users] changing matplotlib fonts in illustrator

2009-06-14 Thread per freem
hello all,

I make my figures in matplotlib and then output them (using savefig) as
.pdf.  I am using Fedora linux.

When I try to edit the font in the figure to Helvetica using Illustrator, I
cannot. i am able to select the fonts, e.g. labels on the axes of the
figure, but when i try to change the font it does not work. apparently the
font information has been lost.

is there a way to make the .pdf file contain the font? or is the solution to
export it as a different file format (if so which)?

p.s. i do not have helvetica on the system that generates the plots so i
cannot set it programmatically... this is why i export it using the default
matplotlib font and then try to edit it in illustrator.

thanks.
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Re: [Matplotlib-users] New contourf() drawing polygon boundaries for some reason?

2009-06-14 Thread Michael Droettboom

On 06/12/2009 05:27 PM, Zane Selvans wrote:

If I set path.simplify: False, the shape of the gaps between the
filled polygons does change.  Instead of being irregular, it becomes
an infinitessimally thin gap of uniform width, allowing the (in this
case white) background to show through.
   
Just to clarify, these backs only show with the Mac OS-X gui window, not 
with the PNG or PDF output (which are actually handled by the Agg and 
PDF backends respectively, and don't use the Cocoa/Quartz-specific code 
in the macosx backend).


If that's the case, I'll forward this thread to the attention of Michiel 
de Hoon, the author of the macosx backend.


As for path.simplify = True causing irregular gaps, that's my area, and 
I'll look into that further.  path.simplify should not be creating 
visible artifacts (at least in raster images such as PNG), so that's a bug.


Cheers,
Mike

In both of these cases (path.simplify: True|False), the PNG version of
the same figures also show representations of these gaps which are
identical to those which appear in the PDF (though obviously
pixelated), so I don't think it's something that's wrong in the vector
graphics code per se.

Zane

On Fri, Jun 12, 2009 at 11:46 AM, Michael Droettboommd...@stsci.edu  wrote:
   

Shot in the dark here, but what if you set the rcParam path.simplify to
False?  There have been recent changes to that code.

Also, since the Agg backend doesn't have an associated GUI, you need to use
the savefig() command and provide a filename, rather than using show().

Cheers,
Mike

Zane Selvans wrote:
 

Um, yeah.  So my response got bounced because of the attachment.  Take 2:

For some reason my script bombed when I switched to the Agg backend,
trying to display to the screen (it said Figure has no method show())

So I output the plot as both a PDF and a PNG (still having backend:
agg in my rcfile) and in both of those cases, irregular gaps are
visible between the polygons making up the filled contours.  This
wasn't the case with my previously installed setup.  It looks as if
for some reason the vertices of the filled polygons are being
calculated differently from different sides of the same contour,
leading to overlap in some places, and gaps in others.  You can download
the PDF version (in which the exact geometry is much clearer).
from:

http://zaneselvans.org/dropbox/LinDensity_Grid.pdf

Zane

On Fri, Jun 12, 2009 at 5:51 AM, Michael Droettboommd...@stsci.edu
wrote:

   

So you see this behavior if you switch to the Agg backend?  That's the
backend used to generate the images in the gallery.  If there's a
difference
there, that would seem to suggest some tweaking of the macosx backend
(which
is still relatively new) is in order.

Mike

Zane Selvans wrote:

 

I just installed the latest SciPy Superpack in order to get access to
the scipy.spatial.KDTree class, and discovered that for some reason
now when I use contourf() lines get drawn at the boundaries between
the filled contours.  Additionally, there is always a single vertical
line crossing from each contour boundary to the next.  I'm guessing
that these are the edges of the filled polygons which are getting
drawn.  This behavior doesn't seem to be consistent with the
contourf() documentation and when I run code in griddata_demo.py it
doesn't come out looking like the picture in the documentation/example
gallery...

Is anyone else seeing this behavior?  Is there a keyword I can use to
force the edges of the polygons not to get drawn?

This is on Mac OS X 10.5.7, with
scipy.__version__ = 0.8.0.dev5635
matplotlib.__version__ = 0.98.6svn
numpy.__version__=1.4.0.dev6728

As installed by superpack_2009.03.28.sh
from http://macinscience.org/?page_id=6

using:
backend: macosx

Cheers,
Zane



   

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Science Software Branch
Operations and Engineering Division
Space Telescope Science Institute
Operated by AURA for NASA



 



   

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Science Software Branch
Operations and Engineering Division
Space Telescope Science Institute
Operated by AURA for NASA


 




   


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Re: [Matplotlib-users] changing matplotlib fonts in illustrator

2009-06-14 Thread Michael Droettboom
You might want to try setting the rcParam pdf.fonttype to 42 (i.e. 
TrueType mode), which will avoid font subsetting.


You may also want to try using the Ps backend, which does support 
Helvetica directly.  matplotlib ships all of the standard Ps font 
metrics as part of matplotlib.  Be sure to set ps.useafm to True.


Mike

On 06/14/2009 04:54 PM, per freem wrote:

hello all,

I make my figures in matplotlib and then output them (using savefig) 
as .pdf.  I am using Fedora linux.


When I try to edit the font in the figure to Helvetica using 
Illustrator, I cannot. i am able to select the fonts, e.g. labels on 
the axes of the figure, but when i try to change the font it does not 
work. apparently the font information has been lost.


is there a way to make the .pdf file contain the font? or is the 
solution to export it as a different file format (if so which)?


p.s. i do not have helvetica on the system that generates the plots so 
i cannot set it programmatically... this is why i export it using the 
default matplotlib font and then try to edit it in illustrator.


thanks.


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