Dear friends and colleagues
I am trying to run physignal in geomorph (R), but I am running into a
problem I do not understand. Here is the code I am using and the error
message:
physignal(ursid_phyl, Regr_res_av, iter=99)
Error in match.names(clabs, names(xi)) :
names do not match
Anneke,
You are using match() incorrectly. See below:
library(geomorph)
Loading required package: rgl
data(plethspecies)
Y.gpa-gpagen(plethspecies$land)
physignal(plethspecies$phy,Y.gpa$coords,method=Kmult,iter=99)
$phy.signal
[,1]
[1,] 0.9572538
$pvalue
[,1]
[1,] 0.03
However Anneke, the error that you first get is not our catch of the names
not matching, but is instead coming from somewhere within, but where I
cannot immediately tell. Perhaps send me the traceback.
Also note that name.check() only works with data in a 2d matrix and not a
3d array.
Emma
