Dear listers,
I have to analyze more than one thousand images. Since the analysis
itself is quite simple, I have been able to automate it in MATLAB.
However, the input images are in a TIFF format with some kind of
compression (LZW). MATLAB is not able to open this compressed format. I
am able
-BEGIN PGP SIGNED MESSAGE-
Hash: SHA1
Try imagemagick's mogrify http://www.imagemagick.org/
http://www.imagemagick.org/www/mogrify.html
- -Paul
On Wed, 26 Jan 2005 13:19:40 -0500
morphmet [EMAIL PROTECTED] wrote:
Dear listers,
I have to analyze more than one thousand images
) of the bending energy matrix that is based solely on the
reference.
Partial warp scores may, of course, be correlated, hence the utility of
relative warps analysis.
Best, dslice
On Thu, 2005-01-27 at 04:37, Dennis Slice wrote:
---
From: morphmet[SMTP:[EMAIL PROTECTED
components
of the partial warps and hence are orthogonal. You may select several first
RWs, say 1st to 5th, which may appear enough to represent similarities among
your objects.
Cheers
Igor
- Original Message -
From: morphmet [EMAIL PROTECTED]
To: morphmet morphmet@morphometrics.org
Sent
Hi Andrea,
I am not sure if this would work, but I would guess that it should work
through a PC emulator (e.g. Virtual PC, no on v.7) since it emulates usb
ports as well
Cheers
Jess
Jess Marugn-Lobn
Unidad de Paleontologa. Dpto. Biologa
Universidad Autnoma de Madrid
28049 Cantoblanco,
morphmet escreveu:
differ too? I am aware about Rohlf's warnings (Syst, Biol.) on the
use of single partial warps as homologous characters, but I am not
yet convinced this apply to my case.
They should apply, I regret to say. This is a consequence of the very
mathematical definition
. Ledeganckstraat 35, B-9000 Gent
BELGIUM
tel: +32 9 264.52.19, fax: +32 9 264.53.44
E-mail: [EMAIL PROTECTED]
URL: http://www.fun-morph.ugent.be/
http://www.zoologymuseum.ugent.be/
-Original Message-
From: morphmet [mailto:[EMAIL PROTECTED]
Sent: donderdag 27 januari 2005 22:45
To: morphmet
Subject
In working with some new subscribers, I have noticed a slight change to
the morphmet archive. The older archive has been tagged inactive and
will not appear in a list search from the www.mail-archive.com home
page. Only the new one will be found. The older archive is still
available at:
http
For any who were considering submitting an abstract to the Morphometrics
Symposium at the upcoming North American Paleontology Convention (NAPC),
please be aware the abstract deadline has been extended to 28 February (see
http://meguma.earthsciences.dal.ca/napc/napc.htm). So, you've got another
would be happy to send you the program.
Tim
Timothy D. Weaver
Department of Human Evolution
Max Planck Institute for Evolutionary Anthropology
Deutscher Platz 6
D-04103 Leipzig GERMANY
+49 (0) 341 3550 - 365
[EMAIL PROTECTED]
http://www.eva.mpg.de/evolution
On Jan 27, 2005, at 3:19 PM, morphmet
Dear listers,
I am interested in some readings and ideas on patterns of species
distribution in the shape morphospace: 1) How the measure dispersion
or patchiness degree of the species points? 2) How to measure the
cloud size?
Thank you in advance.
Miquel Palmer
--
Replies will be sent to the
I have just uploaded ver. 2.04 of tpsDig2 and ver. 1.33 of tpsUtil to the
Stony Brook Morphometrics server.
Changes related to saving of files with outlines were made in tpsDig. Thanks
to Silvina Van der Molen for pointing out an important problem.
Further changes were made in tpsUtil to sort
Brook, NY
11794-5345
-Original Message-
From: morphmet [mailto:[EMAIL PROTECTED]
Sent: Monday, February 14, 2005 10:36 AM
To: morphmet
Subject: scale, sliding semilandmarks, tpsRELW
Hello Morphometricians:
I would like to post a question about centroid size and
sliding
I have just uploaded ver. 1.40 of tpsRelw. The update corrects a problem
with the computation of centroid size after adjusting for sliding landmarks
when the original specimens had scale factors set in tpsDig. The values
should now be similar to those computed without sliding the semilandmarks
(of
.
On Wed, 2005-02-23 at 08:47, morphmet wrote:
Greetings fellow morphometricians
I want to use digital data from CT scans to obtain 3D landmark
coordinates for use in geometric morphometric analysis.
I have looked at a number of software packages (Amira, Mricro, eFilm
Merge), and while
Dear morphometricians,
could you please let me know what software is available for splitting avi
files in a series of gif (or jpg) images?
Thanks a lot for your help.
Cheers
Andrea
Dr. Andrea Cardini
Hull York Medical School
The University of York, Heslington, York YO10 5DD, UK
The University of
Thank you everyone who suggested software that may help me in my
research.
Warren Mitchell
PhD Student
School of Anatomy Human Biology
University of Western Australia
--
Replies will be sent to the list.
For more information visit http://www.morphometrics.org
shark - I see from the Oz Nat. Dictionary that flake is not listed and
hence must be Melbourne dialect for Mustelus antarcticus).
Citerar morphmet [EMAIL PROTECTED]:
Hello All,
I am having issues with singular matrices because the number of variables
(linear morphometric measures) I have far
Functions (Athens 1972). In essence, this volume
covers the entire field in detail.
Richard A. Reyment
Citerar morphmet [EMAIL PROTECTED]:
Dear Colleagues,
I will appreciate any information regarding published papers that use
discriminant functions in taxonomy and systematics. I am currently
-5245
www: http://life.bio.sunysb.edu/ee/rohlf
-Original Message-
From: morphmet [mailto:[EMAIL PROTECTED]
Sent: Monday, March 21, 2005 6:02 PM
To: morphmet
Subject: Re: generalised inverse matrices
Brett-
I'm not sure just what analysis you are carrying out, but one
alternative
Dear colleagues,
I would like to thank Dr. Bameul and Dr. Reyment for their help regarding my
discriminant function question. However I will appreciate any advice regarding
the following problem:
It is customary to do systematic analyses on landmarks from half of the skull,
considering at
Dear morphometricians,
once more, Id like to have your help and ask you some questions:
1) Is there anybody who has experience with landmark digitization
directly on living human faces?
2) Could you please let me know about papers on human face variation?
And also on sexual dimorphism of the
Hi Pablo,
as far as the first one of your questions is concerned, I suspect that
you can easily rotate all specimens in order to have the axis of
symmetry in the direction of the x axis by superimposing specimens with
Morpheus and then restoring size. Prof. Slice can tell you more (if this
Quoting morphmet [EMAIL PROTECTED]:
Dear Colleagues,
I will appreciate any information regarding published papers that use
discriminant functions in taxonomy and systematics. I am currently
doing field
research in Ecuador and bibliographic databases are out or reach.
Thanks for your
Dear Andrea:
Here are some responses to your numbered questions:
1) Do you mean capturing landmark data directly from the face using a
digitizing instrument or from data that has been captured using some imaging
technique? We landmark data in 2-D and 3-D from patients and volunteers
I have just uploaded ver. 1.42 of tpsRelw. It fixes a bug in the display of
the variances of landmark positions after the GPA superimposition. Thanks to
Dominique Adriaens for discovering and reporting the problem.
---
F. James Rohlf, Distinguished Professor
State University
www: http://life.bio.sunysb.edu/ee/rohlf
-Original Message-
From: morphmet [mailto:[EMAIL PROTECTED]
Sent: Thursday, May 26, 2005 8:07 AM
To: morphmet
Subject: Morphometric analysis
[Oops, found a couple of postings I missed. No excuses.
-Moderator (a.k.a. dslice)]
I'm
to the outlines, between the final
semi-landmarks and the outlines.
Best regards,
Ben
p.s. Have both been used?
-Original Message-
From: morphmet [mailto:[EMAIL PROTECTED]
Sent: 26 May 2005 14:26
To: morphmet
Subject: Re: Morphometric analysis
Dear Catherine,
You
The second circular for the upcoming Algorithmic Approaches to the
Identification Problem in Systematics symposium has just been released
(see below). This symposium will be held on 19 August 2005 in the Flett
Theater of the Natural History Museum, London. Its purpose is to
provide leaders of
I want to perform comparative anlyses of shape variation using trusses
and newer geometric analyses (including outlines). I have already
carried out a TPS analysis and now wish to proceed with an anlysis based
on truss measurements. I would like to measure truss lengths between
pairs of
Concerning the identification of the authors of morphmet posting, Jim
Rohlf pointed out that IF you give your full name AND you are listed in
the suny morphometrics directory(*), THEN other list members can look up
your address for a personal response.
-the Moderator (aka dslice)
(*) see
(incl. some pdf-files). If
you are interested in these, please, send me ([EMAIL PROTECTED])
your e-mail address (I am not sure, whether in morphmet attachements are
allowed).
Best
Fränzi
- Original Message -
From: morphmet [EMAIL PROTECTED]
To: morphmet morphmet@morphometrics.org
Sent
University
ul. Bol'shaya Nikitskaya 6
125009 Moscow
Russia
E-mail [EMAIL PROTECTED]
Home page http://zmmu.msu.ru/personal/pavlinov/pavlinov_eng.htm
- Original Message -
From: morphmet [EMAIL PROTECTED]
To: morphmet morphmet@morphometrics.org
Sent: Tuesday, August 02, 2005 3:29 PM
Subject
Hi all,
The references for using confocal microscopy in morphological
measurement are:
Evans AR, Harper IS, and Sanson GD. 2001. Confocal imaging,
visualization and 3-D surface measurement of small mammalian teeth.
Journal of Microscopy 204: 108-118.
Evans AR. 2005. Connection morphology,
/museum/microfossils/index.html
Zitat von morphmet [EMAIL PROTECTED]:
Dear Chris,
I have done some work on collecting 3D surfaces using confocal
microscopy which is in a bit more detail than Jernvall's paper: Evans
AR, Harper IS, and Sanson GD. 2001. Confocal imaging
Dear colleagues,
Does anyone know about the application of 3d scanner in digitalization
of insect specimens? How? How much?
yours sincerely,
Ming BAI
--
Dr. Ming BAI
Box 36, Institute of Zoology
Chinese Academy of Sciences
25 Beisihuanxi Road, Haidian District
Beijing, 100080
[Also posted on the www.morphometrics.org Jobs site. -Moderator]
I am the National Academy of Sciences Research Advisor for
a postdoctoral research opportunity related to 3-D morphometry. Here
is the link:
http://www4.nationalacademies.org/PGA/rap.nsf/ByTitle/13.15.11.B6109?OpenDocument
I
A link to the following paper has been added to the morphometrics
library:
Nolte AW, Sheets HD (2005) Shape based assignment tests suggest
transgressive phenotypes in natural sculpin hybrids (Teleostei,
Scorpaeniformes, Cottidae). Frontiers in Zoology 2005, 2:11
(doi:10.1186/1742-9994-2-11)
GEOMETRIC MORPHOMETRICS WORKSHOP
IOWA STATE UNIVERSITY
AMES, IOWA, USA
May 29 June 2, 2006
An NSF-sponsored Morphometrics workshop will be held at Iowa State
University, Ames, Iowa, USA from May 29 to June 2, 2006. The instructors
will be: Dean C. Adams (Iowa State University), F. James Rohlf
Hi everyone!
Original question:
(I'll get to the point quickly.) From what I've read, an extra set of
simultaneous equations,
Sw = 0 .. (1)
Swx = 0 .. (2)
Swy = 0 .. (3)
(S = summing over w, x, and y, where appropriate)
are required to
works for me.
Cheers,
Ian
morphmet wrote:
I would like to post the following question on the mailing list (I'm new
on the list and apologize if the same question has come up several times
before!):
I have been advised to carry out a MANCOVA with CS as the covariate -
this should be the most
Hi Ian,
My problem was to make tpsRegr read the .nts file, and you suggestion
worked very well for me. I want to thank you very much for the
suggestion - I could have spent several more days on it without getting
it right!
Thanks a lot, Hanne
morphmet [EMAIL PROTECTED] wrote:
Hanne
Dear List,
I am investigating shape variation in the carapace of Antarctic krill.
In short - I have 17 samples of krill from 4 surveys in different
regions of Antarctica. The acquisition of these samples was very
opportunistic so I do not have replicate samples either within or
between
). Is this how to to go about the
problem? Anyone care to shed light please?
Many thanks,
- Olumide
PS: (Related questions)
(1) Bookstein
(http://www.mail-archive.com/morphmet@morphometrics.org/msg00015.html)
advocates the use of |r| instead of the familiar basis function
r*r*log(r
A morphometrics workshop will be held next June at the Middle East Technical
University, Ankara, TURKEY. This workshop is offered especially to
researchers and graduate students from countries in Southern Europe, the
Middle East, and the Balkans, who are interested in shape variation in
organisms.
September 30, 2005
This is a reply to Luke Finley's question of earlier today
about using nonmetric techniques with shape coordinates.
I'll refer to the questioner in the second person, as you.
Your rationale for using MDS is actually the list of
://life.bio.sunysb.edu/ee/rohlf
-Original Message-
From: morphmet [mailto:[EMAIL PROTECTED]
Sent: Friday, September 30, 2005 6:50 PM
To: morphmet
Subject: Re: PWS and MDS?
September 30, 2005
This is a reply to Luke Finley's question of earlier
Dear List,
I followed the discussion of the prior task PSW and MDS and it was very
interesting what Fred Bookstein replied to the outgoing posting regarding
the use of MDS:
My rationale for using MDS instead of PCA is (1) uneven sample sizes /
missing data, (2) lack of replicate samples, (3) a
]
-Ursprüngliche Nachricht-
Von: morphmet [mailto:[EMAIL PROTECTED]
Gesendet: Dienstag, 4. Oktober 2005 17:10
An: morphmet
Betreff: RE: MDS, PCA, PCoA or CVA?
The data and the problem you describe are not unusual but
they do not correspond to the type of data normally
discussed on the morphmet
Hi,
Does anyone know how to do a weighted generalized procrustes analysis. I
have written the code to do the GPA and some derived versions, but would
klike to add the weighted component to it. I know the general principle,
minimise the mahalanobis distances instead of the eaculidean, but the
Dear all,
I wonder if any of you can help me with references to specific papers,
laboratories or people that are actually working using morphometric
tools to study the shape development during ontogeny or
intra-population shape variation in flatfish species.
Any imput will be highly appreciated.
[Also posted on www.morphometrics.org | Jobs. - the Moderator]
Please feel free to pass on, print and hang up.
*Ecological and evolutionary significance of size in planktic protists*
Two PhD fellowships are available as part of a broader research theme
concerning size and diversity change of
Hi All,
I have put the documentation of the java classes on line:
http://www.kimvdlinde.com/professional/programming/alignment/doc/index.html
Please keep in mind, it is in progress stuff, and not all documentation
is fully updated yet.
Cheers,
Kim
--
http://www.kimvdlinde.com
--
Replies will
Hello everybody
I was wondering if anybody knows if someone is working
with moths (or lepidoptera) wings an morphometrics
(better if geometrical).
I'm currently working with Tecia solanivora,the
guatemalan potatoe moth.
Thank you all
Nathalia Hernandez
Pontificia Universidad Catolica del
morphmet wrote:
Hello everybody
I was wondering if anybody knows if someone is working
with moths (or lepidoptera) wings an morphometrics
(better if geometrical).
I'm currently working with Tecia solanivora,the
guatemalan potatoe moth.
Thank you all
Nathalia Hernandez
Pontificia
, the scales would be easily removed. I use a curved micropin.
Besides, I mounted the wings on slides but didn't have to dye them. Hope
my hints could suit you, Angela Roggero
morphmet wrote:
Thank you all for your messages. Great help!
So far I've been taking the scales off with alcohol
(or just
Saad -- Jukka Jernvall, who is a member of our graduate progream but
mostly in Helsinki, has done this with mammal molar development and
evolution. I hope to do some work like this as we begin to look more at
expression patterns in the brain and other stickleback structures.
-- Mike Bell
.
-dslice
On Thu, 2005-10-27 at 04:59, morphmet wrote:
Hello,
I am interested in obtaining software for converting standard cranial
measurements into 3-dimensional coordinate data. I am very much
interested in geometric morphometric analyses of craniofacial variation,
but do not have access
Michael,
As a follow-up to posts by Dennis Slice and Mauro Cavalcanti, the Morpheus
File|Import|Truss feature can reconstruct 3D landmark coordinates from
interlandmark distances (ILDs). It is public domain and easy to use.
However, it cannot reconstruct 3D landmark locations from standard
Hello -
Does anyone know where else I can find the Edgewrap3D program? The
server ftp://brainmap.med.umich.edu/pub/edgewarp3/ appears to be down.
Thanks,
- Olumide
[EMAIL PROTECTED]
--
Replies will be sent to the list.
For more information visit http://www.morphometrics.org
On Sat, Oct 29, 2005 at 02:41:35PM -0400, morphmet wrote:
Hello -
Does anyone know where else I can find the Edgewrap3D program? The
server ftp://brainmap.med.umich.edu/pub/edgewarp3/ appears to be down.
Thanks,
- Olumide
[EMAIL PROTECTED]
The ftp server has been moved. The new
Can someone point me to the correct TPS or IMP software that will
appropriately handle paired and or nested data, if they do?
I have left brain hemisphere and right brain hemisphere data. I'm
interested in showing left to right differences are less than animal
to animal differences.
-Dave
University of New York, Stony Brook, NY 11794-5245
www: http://life.bio.sunysb.edu/ee/rohlf
-Original Message-
From: morphmet
[mailto:[EMAIL PROTECTED]
Sent: Sunday, October 30, 2005 3:23 AM
To: morphmet
Subject: paired analyses
Can someone point me to the correct TPS or IMP
and 0s (or whatever coding scheme I choose),
plus the stuff at the file top you show in your help.
Thanks for the pointer. I did not realize tpsRegr in this way can do
any general linear model.
-Dave
On Oct 30, 2005, at 11:18 AM, morphmet wrote:
The tpsRegr program is very flexible
Hi all,
I have created a .tps file with multiple images using TPSdig. All the
images were bmp and are 2D. I can read my .tps file in WordPad.
However, the file will not open in any of the other TPS software. Also,
when i try to re-open my .tps file in TPSdig it says the file is not found.
://life.bio.sunysb.edu/morph
-Original Message-
From: morphmet [mailto:[EMAIL PROTECTED]
Sent: Tuesday, November 01, 2005 11:21 AM
To: morphmet
Subject: getting TPS programs to read TPSPdig file..help!
Hi all,
I have created a .tps file with multiple images using TPSdig.
All the images were
Stephanie,
tpsDig hates long paths; it returns odd error messages when you are trying
to open a tps file in a deep folder. This doesn't sound like the problem
you're experiencing. However, you can try moving the file and images to a
higher folder with a short name, like C:/analysis.
It would be
Hello Morhpometricians -
Caveat:
I am very new to the field of morphometrics. In fact, I am neither a
biologist or an anthropologist. I am a PhD student of computer graphics
and my work involves warping and deformation of objects, thus my
interest in morphometrics. I hope this explains why I
Hello Morhpometricians
I am just starting to use morphometrics and I am having a bit of trouble
with the software. I have collected young-of-the-year Brook charr from
two contrasting environments. I am looking at differences in shape
and ontogenetic sequences (bone and cartillage formation). I
On Nov 3, 2005, at 7:44 AM, morphmet wrote:
Good morning morphometricians
...
c) Again when comparing groups within a sample, is there some way of
evaluating which are the landmarks that contribure more to the observed
differences?-
Antigoni et al.,
I will respond to question (c), which
Dear friends,
I would like to receive opinions about the correct translations of form,
and shape into Spanish. My suggestions below:
form - forma
shape - estructura
Because most literature on morphometrics is available in english, I am
unsure about the standard approach to the translation of
-
From: morphmet [EMAIL PROTECTED]
To: morphmet@morphometrics.org
Sent: Thursday, November 10, 2005 1:57 AM
Subject: Form, and shape translations to spanish
Dear friends,
I would like to receive opinions about the correct translations of form,
and shape into Spanish. My suggestions below:
form
I don't know if there is a consenus, but at least in the standard meaning
both form and shape can be translated as forma. When
dealing with two dimensions forma is used also as outline.
Estructura is more simple= structure.
Hope it helps
Sergio
Date forwarded: Wed, 9 Nov 2005 22:58:28
disregarding any other possible translations.
Thanks again for all your answers.
Pablo
Pablo Jarrin
Grad. Student
Department of Biology
Boston University
Quoting morphmet [EMAIL PROTECTED]:
Switching hats* ...
It is really the same problem in English. Most people use form and
shape to mean
expression was constructed to do the work rather than use a
set of templates. It is therefore not necessary, nor even desirable, to
attempt to translate the word SPLINE into other tongues.
Richard A. Reyment
Citerar morphmet [EMAIL PROTECTED]:
I have been teaching morphometrics for some time
: 0054-342-4740723
Fax: 0054-342-4750394
E-mail: [EMAIL PROTECTED] [EMAIL PROTECTED]
--
- Original Message -
From: morphmet [EMAIL PROTECTED]
To: morphmet@morphometrics.org
Sent: Friday, November 11, 2005 4:42 AM
Universidad de Buenos Aires
Ciudad Universitaria, Pab. II
C1428EHA Buenos Aires
Argentina
[EMAIL PROTECTED]
_
- Original Message -
From: morphmet [EMAIL PROTECTED]
To: morphmet@morphometrics.org
Sent: Friday, November 11, 2005 4:42 AM
Judi,
I understand that Form = size + shape. Therefore form should be related
to both isometric and allometric size effects. Shape is free of isometric
size but allometric effects could remain. There is a preform space
which is composed of all objects translated to a common origin, with size
and others) but Forma (as JP Dujardin defines it) won't be the same as
Form.
I think this is getting too confused..
Judi
- Original Message -
From: morphmet [EMAIL PROTECTED]
To: morphmet@morphometrics.org
Sent: Monday, November 14, 2005 4:04 AM
Subject: Re: Form, and shape translations
-
From: [EMAIL PROTECTED]
[mailto:[EMAIL PROTECTED] On Behalf Of morphmet
Sent: Wednesday, November 16, 2005 4:04 AM
To: morphmet
Subject: largest 3D sample
Dear morphometricians,
could you please let me know any reference on 3D geometric morphometric
analyses of any animal taxon with large
.
F. James Rohlf, Distinguished Professor, Graduate Program Director
Dept. Ecology Evolution, Stony Brook University, Stony Brook, NY
11794-5245
Web: http://life.bio.sunysb.edu/ee/rohlf
Morphometrics: http://life.bio.sunysb.edu/morph
-Original Message-
From: morphmet
Judi,
Lets just assume for now that Dr. DuJardin made a semantic mistake on his
definition of form. All the rest is correct, and avoid any more confussion.
Good luck
Pablo
Quoting morphmet [EMAIL PROTECTED]:
Pablo,
I agree with you on this. The thing was that before this discussion
I
Dear morphometricians,
I apologise for interrupting you. I will be graduating this year
(Faculty of Medicine) and I am looking for a PhD fellowship. During the
last 3 years I have worked within the Anatomy Department and performed
several studies: shape variation of atlas vertebra and talus,
I have a question for the group. I am going to be microscribing some
rather fragile fossils and the curator of one of the collections has
asked that I use a plastic tip for my microscribe, as opposed to the
metal tips. However, I have been unable to find a place to purchase a
plastic tip.
Has
Dear colleagues
For some time I've been working on a morphometrics software package
(working title MorphoJ) that's intended to provide a relatively
user-friendly interface for the sort of analyses going on in my lab.
Once it will do some useful things and once it has been tested, I
will
Hi, Chris--
Your software package sounds very useful. I would be most interested to
get information about it when it is released.
Has anyone in the community thought about this? Or are there even
existing specifications of a file format of this type? And are others
interested in this sort of
At 16:07 29/11/2005, you wrote:
1. I would like to draw a neighbour-joining tree from the morphometric
data set (Euclidean distances), and get confidence intervals or some
statistical support for the branches. Recently Couette et al. (J.Mammal.
86:773-781, 2005) used 1000 bootstraps to get the
Dear Tuomas,
you can do plenty of resampling statistics with the last version of
NTSYSpc (version 2.2). NTSYSpc does also geometric morphometrics and a
very wide variety of analyses of quantitative characters. You can also
easily write a batch file with commands to do everything in a single
run.
dear all
I am comparing the shape divergence against neutral genetic divergence of
threespine stickleback populations, and have two questions:
1. I would like to draw a neighbour-joining tree from the morphometric
data set (Euclidean distances), and get confidence intervals or some
Hello all
does anyone know whether GM or other morfometrics have been applied to
the quantification of shape differences in the lateral line of fish?
For non-fish-savy folk, the lateral line is row of scales that form a
visible line from the gills to the tail fin, and plays a
pressure-sensory
Program Director
Dept. Ecology Evolution, Stony Brook University, Stony Brook, NY
11794-5245
Web: http://life.bio.sunysb.edu/ee/rohlf
Morphometrics: http://life.bio.sunysb.edu/morph
-Original Message-
From: morphmet [mailto:[EMAIL PROTECTED]
Sent: Friday, December 02, 2005 10:53 AM
Dear morphmeters,
I am new in the field of morphometrics and just discovering all it's
possibilities. I used ImageJ to record some landmarks on a
butterfly-wing, and saved them as excel files. Is it possible to get the
coordinates into one of the 'tps' programs to do a superimposition? I
think
directions for getting R to work for you. It is
cross-platform and GNU-public (i.e. free).
Joe Kunkel
[EMAIL PROTECTED]
On Dec 6, 2005, at 10:19 AM, morphmet wrote:
Dear morphmeters,
I am new in the field of morphometrics and just discovering all it's
possibilities. I used ImageJ to record some
Dear morphometricians,
could you please suggest me any reference on studies which test the effect of
sample size on results of analyses of a) geometric morphometric data or b)
traditional morphometric measurements?
Thanks a lot, in advance, for your help.
Cheers
Andrea
Dr. Andrea Cardini
Hull
the craniofacial morphology of cercopithecine monkeys in a phylogenetic
framework. Projects now involve a wide range of living and fossil primate
taxa, as well as many different skeletal elements.
We write here to announce three pieces of free software that may be useful
to MORPHMET
Hi everybody,
I´m working with 3D data (human brains). After the routine analysis I have
obtained the W matrix of partial warp scores. A Canonical variate analysis
of the W matrix suggest that there are significant differences among my
groups. Now the problem is how to visualize, or at least
[ Also posted at under Jobs at http://www.morphometrics.org - Mod ]
The Pennsylvania State University Department of Anthropology: Post
doctoral associate
Focus: morphometrics, image analysis, genetics (QTL), primate phylogeny,
developmental genetics
We are looking for excellent post doctoral
Hi all,
I've noticed in the literature that different people use either partial warp
scores or relative warp scores when conducting a CVAs. Can anyone tell me how
to choose which is more appropriate for a given analysis?
Thanks, Shaun
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for Anthropology
University of Vienna
Vienna, Austria
On Tue, 2005-12-13 at 11:28, morphmet wrote:
Hi all,
I've noticed in the literature that different people use either partial warp
scores or relative warp scores when conducting a CVAs. Can anyone tell me how
to choose which is more
Morphometrics: http://life.bio.sunysb.edu/morph
-Original Message-
From: morphmet [mailto:[EMAIL PROTECTED]
Sent: Tuesday, December 13, 2005 11:28 AM
To: morphmet
Subject: CVA - Partial Warps vs Relative Warps
Hi all,
I've noticed in the literature that different people use
either
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