[Numpy-discussion] avoid a line...

2011-03-17 Thread dileep kunjaai
Dear sir, I am try to read a file of the following format, I want to avoid the first line and read the remaining as 'float' . Please help me... RainWindTempPrSal 0.11.10.020.2 0.2 0.50. 0. 0.4 0.8 0.55.51.50.5 1.5 3.50.51.5

Re: [Numpy-discussion] avoid a line...

2011-03-17 Thread eat
Hi, On Thu, Mar 17, 2011 at 9:36 AM, dileep kunjaai dileepkunj...@gmail.comwrote: Dear sir, I am try to read a file of the following format, I want to avoid the first line and read the remaining as 'float' . Please help me... RainWindTempPrSal 0.11.10.020.2

[Numpy-discussion] Norm of array of vectors

2011-03-17 Thread Andrey N. Sobolev
Dear all, Sorry if that's a noob question, but anyway. I have several thousands of vectors stacked in 2d array. I'd like to get new array containing Euclidean norms of these vectors and get the vector with minimal norm. Is there more efficient way to do this than argmin(array([sqrt(dot(x,x))

Re: [Numpy-discussion] Norm of array of vectors

2011-03-17 Thread eat
Hi, On Thu, Mar 17, 2011 at 10:44 AM, Andrey N. Sobolev inco...@list.ru wrote: Dear all, Sorry if that's a noob question, but anyway. I have several thousands of vectors stacked in 2d array. I'd like to get new array containing Euclidean norms of these vectors and get the vector with

Re: [Numpy-discussion] Norm of array of vectors

2011-03-17 Thread gary ruben
How about argmin(add.reduce((a*a),axis=1)) In [5]: a Out[5]: array([[ 0.24202827, 0.01269182, 0.95162307], [ 0.02979253, 0.454 , 0.49650111], [ 0.52626565, 0.08363861, 0.56444878], [ 0.89639659, 0.54259354, 0.29245881], [ 0.75301013, 0.6248646 ,

Re: [Numpy-discussion] avoid a line...

2011-03-17 Thread dileep kunjaai
Thanks sir,, thanks a lot .. On Thu, Mar 17, 2011 at 1:16 PM, eat e.antero.ta...@gmail.com wrote: Hi, On Thu, Mar 17, 2011 at 9:36 AM, dileep kunjaai dileepkunj...@gmail.comwrote: Dear sir, I am try to read a file of the following format, I want to avoid the first line and read

Re: [Numpy-discussion] Build ERROR ConfigParser.MissingSectionHeaderError: File contains no section headers

2011-03-17 Thread Jose Borreguero
Thanks Josef, that worked! I was confused because I was thinking of site.cfg as some sort of bash script :) Jose On Thu, Mar 17, 2011 at 12:40 AM, josef.p...@gmail.com wrote: On Thu, Mar 17, 2011 at 12:23 AM, Jose Borreguero borregu...@gmail.com wrote: Dear Numpy/SciPy users, I have a

Re: [Numpy-discussion] Fortran was dead ... [was Re:rewriting NumPy code in C or C++ or similar]

2011-03-17 Thread Yung-Yu Chen
On Wed, Mar 16, 2011 at 17:46, Dag Sverre Seljebotn d.s.seljeb...@astro.uio.no wrote: On 03/16/2011 10:14 PM, william ratcliff wrote: Related to this, what is the status of fwrap? Can it be used with fortran 95/2003 language features? There is a rather large code crystallographic

Re: [Numpy-discussion] Fortran was dead ... [was Re:rewriting NumPy code in C or C++ or similar]

2011-03-17 Thread Dag Sverre Seljebotn
On 03/17/2011 03:23 PM, Yung-Yu Chen wrote: On Wed, Mar 16, 2011 at 17:46, Dag Sverre Seljebotn d.s.seljeb...@astro.uio.no mailto:d.s.seljeb...@astro.uio.no wrote: On 03/16/2011 10:14 PM, william ratcliff wrote: Related to this, what is the status of fwrap? Can it be used with

Re: [Numpy-discussion] avoid a line...

2011-03-17 Thread Christopher Barker
On 3/17/11 12:46 AM, eat wrote: I am try to read a file of the following format, I want to avoid the first line and read the remaining as 'float' . Please help me... RainWindTempPrSal 0.11.10.020.2 0.2 0.50. 0. 0.4

[Numpy-discussion] ImportError: libatlas.so: cannot open shared object file: No such file or directory

2011-03-17 Thread Jose Borreguero
Dear Numpy/Scipy users, I just installed numpy but I have an error when importing import numpy from numpy.linalg import lapack_lite ImportError: libatlas.so: cannot open shared object file: No such file or directory I have ATLAS libraries under /usr/local/atlas/lib libatlas.a

Re: [Numpy-discussion] ImportError: libatlas.so: cannot open shared object file: No such file or directory

2011-03-17 Thread Ilan Schnell
It looks like atlas wasn't linked right. If you /usr/local/atlas/lib to your LIBRARY_PATH environment variable it should work. - Ilan On Thu, Mar 17, 2011 at 12:23 PM, Jose Borreguero borregu...@gmail.com wrote: Dear Numpy/Scipy users, I just installed numpy but I have an error when

Re: [Numpy-discussion] ImportError: libatlas.so: cannot open shared object file: No such file or directory

2011-03-17 Thread Jose Borreguero
Unfortunately it didn't work. I did: export LIBRARY_PATH=$LIBRARY_PATH:/usr/local/atlas/lib python setup.py build python setup.py install Then in another terminal export LIBRARY_PATH=$LIBRARY_PATH:/usr/local/atlas/lib python import numpy ... from numpy.linalg import lapack_lite

Re: [Numpy-discussion] hashing dtypes, new variation, old theme

2011-03-17 Thread Robert Kern
On Wed, Mar 16, 2011 at 15:21, Mark Wiebe mwwi...@gmail.com wrote: That sounds like a good fix to me. Whenever objects compare equal, they should hash to the same value. There is a limit to how far we can actually satisfy this requirement. For the implementation of np.dtype.__eq__(), we coerce

Re: [Numpy-discussion] hashing dtypes, new variation, old theme

2011-03-17 Thread Mark Wiebe
On Thu, Mar 17, 2011 at 2:35 PM, Robert Kern robert.k...@gmail.com wrote: On Wed, Mar 16, 2011 at 15:21, Mark Wiebe mwwi...@gmail.com wrote: That sounds like a good fix to me. Whenever objects compare equal, they should hash to the same value. There is a limit to how far we can actually

[Numpy-discussion] Nonzero behaving strangely?

2011-03-17 Thread santhu kumar
Hello all, I am new to Numpy. I used to program before in matlab and am getting used to Numpy. I have a array like: res array([[ 33.35053669, 49.4615004 , 44.27631299, 1., 2. ], [ 32.84263059, 50.24752036, 43.92291659, 1., 0. ], [ 33.68999668,

Re: [Numpy-discussion] Nonzero behaving strangely?

2011-03-17 Thread Matthieu Brucher
Hi, Did you try np.where(res[:,4]==2) ? Matthieu 2011/3/17 santhu kumar mesan...@gmail.com Hello all, I am new to Numpy. I used to program before in matlab and am getting used to Numpy. I have a array like: res array([[ 33.35053669, 49.4615004 , 44.27631299, 1., 2. ],

Re: [Numpy-discussion] hashing dtypes, new variation, old theme

2011-03-17 Thread Christopher Barker
On 3/17/11 2:57 PM, Mark Wiebe wrote: Dtypes being mutable looks like a serious bug to me, it's violating the definition of 'hashable' given here: I can imagine other problems is would cause, as well -- is there any reason that dtypes should be mutable? -Chris -- Christopher Barker, Ph.D.

Re: [Numpy-discussion] Nonzero behaving strangely?

2011-03-17 Thread Warren Weckesser
On Thu, Mar 17, 2011 at 5:17 PM, santhu kumar mesan...@gmail.com wrote: Hello all, I am new to Numpy. I used to program before in matlab and am getting used to Numpy. I have a array like: res array([[ 33.35053669, 49.4615004 , 44.27631299, 1., 2. ], [ 32.84263059,

Re: [Numpy-discussion] hashing dtypes, new variation, old theme

2011-03-17 Thread Pauli Virtanen
Thu, 17 Mar 2011 15:23:19 -0700, Christopher Barker wrote: On 3/17/11 2:57 PM, Mark Wiebe wrote: Dtypes being mutable looks like a serious bug to me, it's violating the definition of 'hashable' given here: I can imagine other problems is would cause, as well -- is there any reason that

Re: [Numpy-discussion] Nonzero behaving strangely?

2011-03-17 Thread Christopher Barker
On 3/17/11 3:17 PM, santhu kumar wrote: nid = (res[:,4]==2).nonzero() nid tuple turns out to be empty. But the very first row satisfies the criteria. it works for me: In [45]: arr Out[45]: array([[ 33.35053669, 49.4615004 , 44.27631299, 1., 2. ], [ 32.84263059,

Re: [Numpy-discussion] hashing dtypes, new variation, old theme

2011-03-17 Thread Mark Wiebe
On Thu, Mar 17, 2011 at 3:30 PM, Pauli Virtanen p...@iki.fi wrote: Thu, 17 Mar 2011 15:23:19 -0700, Christopher Barker wrote: On 3/17/11 2:57 PM, Mark Wiebe wrote: Dtypes being mutable looks like a serious bug to me, it's violating the definition of 'hashable' given here: I can imagine

Re: [Numpy-discussion] Nonzero behaving strangely?

2011-03-17 Thread santhu kumar
suggestions? Thanks Santhosh -- next part -- An HTML attachment was scrubbed... URL: http://mail.scipy.org/pipermail/numpy-discussion/attachments/20110317/2f46f2c1/attachment-0001.html -- Message: 2 Date: Thu, 17 Mar 2011 23:19:42 +0100

Re: [Numpy-discussion] Norm of array of vectors

2011-03-17 Thread Andrey N. Sobolev
Hi eat and Gary, Thanks a lot for your suggestions, I've tried them in my code and achieved similar speedup of ~270% for both of them. So I guess I'll stick to one of those. Regards, Andrey. Hi, On Thu, Mar 17, 2011 at 10:44 AM, Andrey N. Sobolev inco...@list.ru wrote: Dear all,

[Numpy-discussion] split() for slices?

2011-03-17 Thread Benjamin Root
Hello, I really like the split() family of functions, but I have the need to split multiple arrays in a similar manner, and it would seem logical to me to have a split() function that would return a list of slice tuples that I could use on multiple arrays. Is there such a function? Thanks, Ben