Re: [Numpy-discussion] BLAS and LAPACK ABI questions (mostly OSX related)

2014-06-09 Thread Sturla Molden
Matthew Brett matthew.br...@gmail.com wrote: Is it possible this is related to: https://github.com/numpy/numpy/issues/4007 Possibly, but it seems to be in _dotblas which uses cblas. NumPy has its own cblas.h. Perhaps it conflicts with Apple's? Apple's documentation says that cblas_sdot

Re: [Numpy-discussion] BLAS and LAPACK ABI questions (mostly OSX related)

2014-06-09 Thread Sturla Molden
On 09/06/14 13:40, Sturla Molden wrote: https://github.com/numpy/numpy/issues/4007 Possibly, but it seems to be in _dotblas which uses cblas. NumPy has its own cblas.h. Perhaps it conflicts with Apple's? Apple's documentation says that cblas_sdot returns float, but knowing Apple this might

Re: [Numpy-discussion] BLAS and LAPACK ABI questions (mostly OSX related)

2014-06-09 Thread Sturla Molden
On 09/06/14 14:37, Sturla Molden wrote: Hm, no, the declarations of cblas_sdot seems to be the same. Oh, stupid me, matrix * vector ... Then it must be cblas_sgemv. But those are the same too. Anyway, Enthought Canopy (linked with MKL) is *NOT* affected m =

Re: [Numpy-discussion] BLAS and LAPACK ABI questions (mostly OSX related)

2014-06-09 Thread Olivier Grisel
2014-06-09 14:53 GMT+02:00 Sturla Molden sturla.mol...@gmail.com: I see an Anaconda user reports Anaconda is affected, but Anaconda is linked with MKL as well (or used to be?) Not necessarily. Only if you buy the MKL optimization package: https://store.continuum.io/cshop/mkl-optimizations/

Re: [Numpy-discussion] BLAS and LAPACK ABI questions (mostly OSX related)

2014-06-09 Thread Carl Kleffner
The free windows conda packages are linked against MKL statically, similar to C. Gohlke's packges. My guess: the MKL optimization package supports multithreading and SVML, the free packages only a serial interface to MKL. Carl 2014-06-09 14:59 GMT+02:00 Olivier Grisel olivier.gri...@ensta.org:

Re: [Numpy-discussion] BLAS and LAPACK ABI questions (mostly OSX related)

2014-06-09 Thread Olivier Grisel
2014-06-09 15:51 GMT+02:00 Carl Kleffner cmkleff...@gmail.com: The free windows conda packages are linked against MKL statically, similar to C. Gohlke's packges. My guess: the MKL optimization package supports multithreading and SVML, the free packages only a serial interface to MKL. That

Re: [Numpy-discussion] ANN: NumPy 1.9.0 beta release

2014-06-09 Thread Jaime Fernández del Río
On Sun, Jun 8, 2014 at 1:43 PM, Charles R Harris charlesr.har...@gmail.com wrote: On Sun, Jun 8, 2014 at 2:34 PM, Julian Taylor jtaylor.deb...@googlemail.com wrote: Hello, I'm happy to announce the fist beta release of Numpy 1.9.0. 1.9.0 will be a new feature release supporting Python

Re: [Numpy-discussion] ANN: NumPy 1.9.0 beta release

2014-06-09 Thread Chris Barker
I take nothing ever happened to clean up the datetime64 timezone mess? sigh. -Chris On Sun, Jun 8, 2014 at 1:34 PM, Julian Taylor jtaylor.deb...@googlemail.com wrote: Hello, I'm happy to announce the fist beta release of Numpy 1.9.0. 1.9.0 will be a new feature release supporting Python

Re: [Numpy-discussion] ANN: NumPy 1.9.0 beta release

2014-06-09 Thread Christoph Gohlke
://www.lfd.uci.edu/~gohlke/pythonlibs/tests/20140609-win-amd64-py2.7-numpy-1.9.0b1/ (compare to http://www.lfd.uci.edu/~gohlke/pythonlibs/tests/20140609-win-amd64-py2.7/) I have not investigated any further... Christoph matplotlib 1.3.1

[Numpy-discussion] Reporting a bug to Apple.

2014-06-09 Thread Charles R Harris
Hi All, Julian has tracked down a bug in the Accelerate library in Maverick, details here https://github.com/numpy/numpy/issues/4007#issuecomment-45541678. Is there a registered Apple Developer here who can report the bug to Apple? TIA, Chuck ___

Re: [Numpy-discussion] ANN: NumPy 1.9.0 beta release

2014-06-09 Thread Charles R Harris
of shape (8,3) I have attached a list of failing tests. The full test results are at http://www.lfd.uci.edu/~gohlke/pythonlibs/tests/20140609-win-amd64-py2.7- numpy-1.9.0b1/ (compare to http://www.lfd.uci.edu/~ gohlke/pythonlibs/tests/20140609-win-amd64-py2.7/) I have not investigated any

Re: [Numpy-discussion] ANN: NumPy 1.9.0 beta release

2014-06-09 Thread Jeff Reback
tests. The full test results are at http://www.lfd.uci.edu/~gohlke/pythonlibs/tests/20140609-win-amd64-py2.7- numpy-1.9.0b1/ (compare to http://www.lfd.uci.edu/~ gohlke/pythonlibs/tests/20140609-win-amd64-py2.7/) I have not investigated any further... Christoph

Re: [Numpy-discussion] ANN: NumPy 1.9.0 beta release

2014-06-09 Thread Charles R Harris
: shape mismatch: value array of shape (24,) could not be broadcast to indexing result of shape (8,3) I have attached a list of failing tests. The full test results are at http://www.lfd.uci.edu/~gohlke/pythonlibs/tests/20140609-win-amd64-py2.7- numpy-1.9.0b1/ (compare to http

Re: [Numpy-discussion] ANN: NumPy 1.9.0 beta release

2014-06-09 Thread Charles R Harris
On Mon, Jun 9, 2014 at 6:21 PM, Jeff Reback jeffreb...@gmail.com wrote: The one pandas test failure that is valid: ERROR: test_interp_regression (pandas.tests.test_generic.TestSeries) has been fixed in pandas master / 0.14.1 (prob releasing in 1 month). (the other test failures are for

Re: [Numpy-discussion] Reporting a bug to Apple.

2014-06-09 Thread Frédéric Bastien
Hi, We already did a bug report to Apple, but they didn't acted on this yet. A process call the kernel and it loop infinitly in the kernel. The only way to kill the process is to reboot. Arnaud, how did you report it? Good luck, and if they act on this, I would be happy to know how you did.

Re: [Numpy-discussion] NumPy 1.9.0 beta release

2014-06-09 Thread Sturla Molden
Charles R Harris charlesr.har...@gmail.com wrote: I confess I find the construction odd, but the error probably results from stricter indexing rules. Indeed, (13824,) does not broadcast to (4608,3). Apart from considerations of backward compatibility, should it? Probably not. (But breaking

Re: [Numpy-discussion] ANN: NumPy 1.9.0 beta release

2014-06-09 Thread Charles R Harris
On Mon, Jun 9, 2014 at 6:23 PM, Charles R Harris charlesr.har...@gmail.com wrote: On Mon, Jun 9, 2014 at 6:21 PM, Jeff Reback jeffreb...@gmail.com wrote: The one pandas test failure that is valid: ERROR: test_interp_regression (pandas.tests.test_generic.TestSeries) has been fixed in

Re: [Numpy-discussion] ANN: NumPy 1.9.0 beta release

2014-06-09 Thread Charles R Harris
On Mon, Jun 9, 2014 at 6:47 PM, Charles R Harris charlesr.har...@gmail.com wrote: On Mon, Jun 9, 2014 at 6:23 PM, Charles R Harris charlesr.har...@gmail.com wrote: On Mon, Jun 9, 2014 at 6:21 PM, Jeff Reback jeffreb...@gmail.com wrote: The one pandas test failure that is valid:

Re: [Numpy-discussion] Reporting a bug to Apple.

2014-06-09 Thread Sturla Molden
Frédéric Bastien no...@nouiz.org wrote: OSes Good luck, and if they act on this, I would be happy to know how you did. If we report a segfault Apple will probably think we are to blame. 99.9 % of bug reports come from idiots, and those who screen bug reports are basically payed to hit the

Re: [Numpy-discussion] ANN: NumPy 1.9.0 beta release

2014-06-09 Thread josef . pktd
On Mon, Jun 9, 2014 at 8:49 PM, Charles R Harris charlesr.har...@gmail.com wrote: On Mon, Jun 9, 2014 at 6:47 PM, Charles R Harris charlesr.har...@gmail.com wrote: On Mon, Jun 9, 2014 at 6:23 PM, Charles R Harris charlesr.har...@gmail.com wrote: On Mon, Jun 9, 2014 at 6:21 PM, Jeff

Re: [Numpy-discussion] ANN: NumPy 1.9.0 beta release

2014-06-09 Thread josef . pktd
On Mon, Jun 9, 2014 at 11:10 PM, josef.p...@gmail.com wrote: On Mon, Jun 9, 2014 at 8:49 PM, Charles R Harris charlesr.har...@gmail.com wrote: On Mon, Jun 9, 2014 at 6:47 PM, Charles R Harris charlesr.har...@gmail.com wrote: On Mon, Jun 9, 2014 at 6:23 PM, Charles R Harris