[PyMOL] Side by side views

2007-01-25 Thread David F Burke
Pymol users, I wish to compare several protein structures and was wondering how or if, in pymol, one can view two structures side by side and rotate each structure around their own centre of gravity. This is a bit like stereo view but with different structures in the left and right views. Many

Re: [PyMOL] Side by side views

2007-01-25 Thread Michael Lerner
Warren helped me with a similar problem a while ago (I can't find the link in the mailing list archive), and this might do the job for you: If you download and run my script at http://www-personal.umich.edu/~mlerner/Pymol/mg_pymol_utils.py you can start up two PyMOL sessions. You then type

Re: [PyMOL] Side by side views

2007-01-25 Thread DeLano Scientific
David, This does not exist at present, but thank you for suggesting it. Cheers, DeLano Scientific LLC Subscriber Support Services mailto:del...@delsci.info Not yet a PyMOL Subscriber, but want to support the project? Email sa...@delsci.com to quote your lab, school, or employer. Thank you

[PyMOL] CE Align v0.2 Request for Help (need Windows package).

2007-01-25 Thread Jason Vertrees
PyMOLers, I updated CE Align to fix a slight annoyance. Before, I would translate both molecules to the center and align them. Now, I just move one molecule on top of the other. This allows one to do a poor-man's multiple alignment. For example: cealign 1A15, 1DON cealign 1A15, 1EOT

[PyMOL] Stereo on Sharp LCD

2007-01-25 Thread S. Frank Yan
Hi, I'm testing the Sharp 3D LCD monitor (LL-151-3D) using PyMOL 0.99rc6. By simply pressing the 3D button on the monitor without enabling any stereo in PyMOL, it appears to show somewhat enhanced depth. However, if I enable the quad-buffered stereo in PyMOL, the picture is just smeared. I