Hi,
I have a Python script that sets a system up and then calls cmd.png()
to render an image. I use it to process several files at a time, and
there's no need to look at it while it's working, so I use
pymol -qcr myscript.py
to launch it. It works fine when I ray trace things, but if I just set
Michael,
The -c option forces PyMOL to run in command-line-only mode which means it
doesn't have access to the OpenGL hardware (used by cmd.draw and interactive
graphics). In command-line-only mode, ray tracing (cmd.ray) is the only
option.
Cheers,
Warren
-Original Message-
From:
Jeff,
PyMOL isn't a homology modeling tool, but in combination with something like
GROMACS, you might able to accomplish something like this.
Although one can easily use PyMOL to graft and assemble molecules, that last
step of cleaning up the joints and any missing residues requires an
external
