What I personally do is:
cmd.color(grey50,all)
util.cnc(all)
So that my carbons have the color I wish (grey50), and other atoms are colored
by element.
Best,
Greg
-Original Message-
From: David Hall [mailto:li...@cowsandmilk.net]
Sent: Wednesday, February 10, 2010 1:45 AM
To: Ariel
Dear PyMOL users,
I have noticed a few times now that when I run a .pml script from a
function (i.e. MATLAB generates a .pml file and then does a system
call for PyMOL to run it) or in batch mode (.bat file that just calls
PyMOL.exe -c -u file.pml) and if I am taking pictures with png
then it
Hi all,
Someone recently asked me if there was a way to display field lines with
PyMOL or with an external plugin. Here's what I wrote:
It turns out that PyMOL recently grew the ability to display field lines.
After you've run APBS, you'll have a map object called pymol-generated. Try
this
