[PyMOL] Loops in cartoon mode

2009-12-24 Thread Mirek Cygler
Dear Pymolers, Which parameter controls the smoothing of the loops in cartoon mode? I am trying to make the loops passing through the Calpha atoms of explicitly displayed residues. Can not remember how to set this up. Thanks, Mirek

[PyMOL] Measure surface area

2009-08-10 Thread Mirek Cygler
Hi, How can I get the measure in A2 of the surface area of the surface I display with PyMol? Mirek -- Let Crystal Reports handle the reporting - Free Crystal Reports 2008 30-Day

[PyMOL] Color by residue type

2007-04-09 Thread Mirek Cygler
Hi, I would like to color residues by their type using (more or less) standard colors (e.g. like in sPDBv). Could not find a command in Pymol that would do that. Did I miss it? Is there a way to avoid doing this one residue type at the time? Thanks for you help,

[PyMOL] Distnace objecs

2005-10-26 Thread Mirek Cygler
Hi, I have created several distance objects with the measurement wizard. I would like to manipulate them together. Is there a way to create a new distance object that combines them all? Tried the CREATE command but it did not work. Mirek

[PyMOL] resolution of th eimage

2001-12-15 Thread Mirek Cygler
Hi, The images produced by PyMOL are really nice. Is there a way to define the resolution of the image file? Say I would like to get an image with a resolution of 1600 x 1200 pixels but my screen is only 1400 x 1050? Mirek