Hi Everyone,
I'd like to ask for some help with dash/distance objects. I have PyMOL session
files which show inter-molecular interactions using PyMOL distance objects.
These were created using a script which colours each distance object and merges
them according to type of interaction. The
Hi Harry,
If they've been combined using the group command, you can ungroup them:
fetch 1rx1
# make some distance objects
dist measure01, 19/C, 20/C
dist measure02, 20/C, 21/C
dist measure03, 158/C, 159/C
dist measure04, 157/C, 159/C
# group them
group g1, measure01 or measure02
group g2,
Hi, Harry,
I am curious. How do you merge objects resulting from distance ? Do
you mean to group them? If so, you can use ungroup command to, well,
ungroup them. But if the merged object is generated using a CGO, I doubt
you can unmerge the CGO object. But I don't know dash CGOs, either.
Hi Harry,
As far as I know, this is not currently possible in PyMOL, but perhaps
someone will correct me on this.
-Michael
On Tue, Apr 26, 2011 at 9:27 AM, Harry Jubb hj...@cam.ac.uk wrote:
Hi Michael,
Thank you for your response. The problem is that for types of
inter-molecular
Hi Harry,
For measures (distances, angles, dihedrals), PyMOL can color down to
the level of an object (eg. color blue, measure01). So, once you add
another measure into an extant object, PyMOL cannot separate those two
colors. My suggestion is that you measure into new objects if you
need new
Hi Michael,
Thank you for your response. The problem is that for types of inter-molecular
interaction all of the visual distances are merged into one object in the
sidebar (as if created using the measurement wizard with the merge with
previous option on), for which unfortunately the ungroup
Hi Jason,
Thanks for your response. The colouring is all correct as there is an object
for each interaction type, the problem now is splitting the measures back into
single objects, which Dr Lerner has mentioned is not currently possible. If
this is the case I will try to refine my figures
