Cun,
To answer your last outstanding question, I don't think PyMOL saves
anything beside the basic atom info for PDB files. PSE files--PyMOL
session files--save everything. If you're using linux or a Mac, you
can always just paste the header back on. An unideal solution, but it
will work. For
Hello PyMol users,
I have a lot of pdb files open and I've superposed them to compare the
pockets. Now I would like to see the hydrogen bonds formed by each ligand to
the protein its been crystalised with. I would ideally like an object which
shows hydrogen bonds between the ligand(s) present (I