How do I download pymol 1.4 from the svn.
I used
svn co https://pymol.svn.sourceforge.net/svnroot/pymol/trunk/pymol pymol
but i still got the 1.3 version.
Is the 1.4 version restricted to incentive downloads only??
Thanks,
And why would that be? I thought that pymol is open source and till Warren
was there all updates were available in the open source domain and incentive
builds were limited to windows executable and involving support!!
On Wed, Mar 23, 2011 at 11:15 AM, Mark J van Raaij
a) you're mistaken, Warren's incentive builds had extra features. Also, Warren
had announced pretty clear plans of adding more features to the incentive
builds and not releasing them open source for several years
b) if you've been following the list, Jason has stated that many of the 1.4
I get the mistake..
Thanks all..
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Hello kanika,
your multiplication and your python syntax for multiplication are
wrong, it must be:
alter_state 1, 3m8v_a, (x,y,z)=((-0.5*x+0.866025*y), (0.866025*x+0.5*y),-z)
For REMARK 350, check these scripts:
http://www.pymolwiki.org/index.php/BiologicalUnit
Thanks for pointing out Jason's email. I missed that.
And at the same time I shall learn to read and understand the fine-print
under open source.
On Wed, Mar 23, 2011 at 12:12 PM, li...@cowsandmilk.net wrote:
a) you're mistaken, Warren's incentive builds had extra features. Also,
Warren had
In addition to David's excellent email, I would like to point out that Jason
is extremely dedicated to the open-source future of PyMOL, so much so that I
don't think a better PyMOL maintainer could have been chosen.
I think that, for people who have been using/contributing to PyMOL for a
long
Going to www.pymol.org, clicking on OpenSource and then
sf.net/projects/pymol/develop followed by Download PyMOL Molecular Graphics
System will download pumol-1.3r2-src.tar.bz2.
I would like to know if, and when, 1.4 will be available for downloading.
Stephen P. Molnar, Ph.D.
read Jasons mail:
Greetings,
I'm delighted to announce that the Incentive build of PyMOL v1.4
has been released. Current subscribers can download the binaries
for Windows, Mac and Linux from http://pymol.org/dsc/ip and
access documentation and videos from
Hi Stephen,
I would like to know if, and when, 1.4 will be available for downloading.
Yes, PyMOL v1.4 will be released to the open-source. I will prepare
the v1.4 release file soon (hopefully less than two weeks' time).
As Michael noted, it's nothing insidious: within hours of releasing
the
Thank you for your reply.
I was too much in a hurry to write. I shall curb my impatience and wait for
your announcement.
Stephen P. Molnar, Ph.D. Life is a
fuzzy set
Foundation for Chemistry Stochastic
and
Dear List
I'm trying to automate the following sequence of steps in a PyMOL python
script:
1. Start the mutagenesis wizard
2. Mutate a reside according to an input from the script (some integer
to specify the id)
3. Apply and close the mutagenesis wizard
4. Start the Sculpt Wizard
5. Fix all
You might want to try using Modeller instead.
http://www.salilab.org/modeller/wiki/Mutate%20model
It does higher level modelling.
Jed
Martin Hediger wrote:
Dear List
I'm trying to automate the following sequence of steps in a PyMOL python
script:
1. Start the mutagenesis wizard
2. Mutate a
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