Are you using the same platform for both Grasp and Pymol? I don't think
that big-endian maps (written by an SGI computer) can be read by a
little-endian platform, such as a x86 based PC.
- Esben
The problem is getting the phi map in grasp. Can somebody
explain me how to do it?
This is
I have mad a lot of these pictures, and the solution is to create two
objects for the substrate.
object1, displayed as sticks in the desired color, and
object2 dipslayed as spheres in the desired color(s)
and then set sphere_scale, 0.3, object2
Example (if the file contains a residue named
Thanks for the input.
* sequence colors could (optionally?) match atom (C-alpha)
colors in the 3D view.
Good idea.
* When a 3D-alignment is done, there is a sequence alignment behind.
Having this transferred to the sequence window would be
extremely useful.
Planned -- but this is
Actually, this too was anticipated ; ). On Windows:
for PyMOL commands, simply use
pymolrc
(no extention -- I suppose pymolrc.txt or pymolrc.pml would've made more
sense...)
or for Python code:
pymolrc.py
pymolrc.pym
Cheers,
Warren
--
mailto:war...@delanoscientific.com
Warren
Warren.
I can't speak to the alignment tools, as I don't spend a lot of time in
homology model building, but I would like to second the idea of adding the
selection keywords. They would make my use of pymol that much easier.
Andy
--On Wednesday, May 19, 2004 09:32:17 -0700 Warren DeLano
