[PyMOL] PyMolWiki Update

2007-01-18 Thread Jason Vertrees
PyMolers, In hopes to make the PyMolWiki more open to users, I've updated the software and now users can create their own accounts rather than having to go through me. You have to be logged in to edit pages, but now you can create your own account. The good news for us is that I've also

[PyMOL] Suggestion?

2007-01-18 Thread S. Frank Yan
Hi, I was wondering if we can move and group the molecules in the upper-right molecule panel. Also, it would be even better if PyMOL can show properties stored in the molecule file (e.g. SDF). I guess a separate window may be needed, while in this way you can neatly organize all the related

[PyMOL] Xmlrpc listener

2007-01-18 Thread Mueller, Geoffrey (NIH/NIEHS)
Hi, Could someone please point me toward some information on the xmlrpc listener and how to communicate with pymol using this? I'm trying to interface pymol with some nmr analysis software. Many thanks in advance, Geoff -- Geoffrey A. Mueller, Ph.D. Staff Scientist, NIEHS

Re: [PyMOL] CE-align

2007-01-18 Thread Esben Jannik Bjerrum
Hi Pymol Users I wanted to try the new CEalign command and got the following error: run qkabsch.py Traceback (most recent call last): File /usr/lib/python2.4/site-packages/pymol/parser.py, line 285, in parse parsing.run_file(exp_path(args[nest][0]),pymol_names,pymol_names) File

[PyMOL] How to superimpose two ligands? (GAO FENG) -- Followup

2007-01-18 Thread Jason Vertrees
Message: 4 Date: Wed, 17 Jan 2007 09:21:26 -0800 (PST) From: GAO FENG mcf...@yahoo.com Subject: [PyMOL] How to superimpose two ligands? To: pymol-users@lists.sourceforge.net Message-ID: 621637.747...@web31110.mail.mud.yahoo.com Content-Type: text/plain; charset=iso-8859-1 Hi Everyone,