Re: [PyMOL] problem in showing the electron density map

2009-04-03 Thread Warren DeLano
Peter, Based on what you provided, it doesn't look like you're loading a structure site about which to carve. Does: load test_file.xplor isomesh mesh1, test_file, 1.0 work to show you the whole map? Cheers, Warren From: peter hudson

Re: [PyMOL] Visualizing symmetry

2009-04-03 Thread Warren DeLano
Mark, No, unfortunately PyMOL doesn't have a way of isolating those atoms which strictly lie within a single unit cell. That is a longstanding request. As for the second case, what you're describing should work, provided that the segment identifiers are different. The segi option to symexp

Re: [PyMOL] problem in showing the electron density map

2009-04-03 Thread Robert Campbell
Hi Peter, On Fri, 03 Apr 2009 02:38:03 +0530, peter hudson peter.hudson.pe...@gmail.com wrote: Hello all I am trying to upload the ED map on pymol. but, it is not visible on the screen. Although i checked at pymol wiki and i did as it is given on the wiki. For example. I took ccp4