[PyMOL] allign multiple freme in pymol

Hello All I have a pdb file containing 10 frames . Now I want to align all frame one by one in pymol and then want to save the final coordinate. How it can be done? All suggestions are welcome Thanking you. ABhik --

[PyMOL] alignment of frame

Hello all I want to align each frame pdb w.r.t a specific frame pdb. Let assume i have 10 pdb files.I have another file "avg.pdb". I want to align each pdb w.r.t "avg.pdb" file. I can do it manually using align command i.e align 1, avg. But is there any code or anything by which i can produce

[PyMOL] alignment of frame

Original Message Subject: alignment of frame From:abhik.gh...@bose.res.in Date:Thu, August 9, 2018 3:02 pm To: pymol-users@lists.sourceforge.net -- Hello

[PyMOL] Extra-fit

Hello All I want to know how the "Extra_fit" option works in pymol (Detail algorithm or procedure). Any idea regarding this. All suggestions are welcome. Thank you. -- Check out the vibrant tech community on one of the

[PyMOL] change surface charge color

I have generated protein contact potential image using pymol. Where red color is showing color of negative charge and blue is showing color for positive charge. But want to change both color to black and grey. How it can be done. Please help. Thanking you Regards Abhik