On 28/04/2015 7:04 AM, Jose Claudio Faria wrote:
Hello list,
I update from R 3.1.3 to R 3.2.0patched today.
For all packages I'm getting error message below
install.packages('bpca_1.2-2.zip', repos=NULL)
Error in install.packages(bpca_1.2-2.zip, repos = NULL) :
type == both cannot be
Hi,Why do I get this warning when I run package.skeleton() and how to solve
this problem?
Warning messages:
1: In package.skeleton(name = myPackage, code_files = ~/Desktop/myPkg/R/) :
Invalid file name(s) for R code in ./myPackage/R:
'R'
are now renamed to 'zname.R'
2: In file.rename(from =
Hello,
I have written a user-defined function (myFunc below) with ten arguments. When
calling the function, I get the following message: �Error: wrong result size
(816841), expected 52939 or 1�.
myFunc involves a data frame (named xanloid_set), which has 816841 rows. R is
correct to say that
Hi Ghada,
The value returned by Mclust (m in your example) has different
components from say the hierarchical clustering. The second argument
for cluster.stats is the cluster IDs of the objects in the initial
set. Perhaps if you call it like this:
cluster.stats(d,m$classification)
I don't have
I still cannot solve the problem: 'invalid function value in 'nlm'
optimizer'
I want to get the MLE for theta[1] and theta[2], my code is below:
x - c(2,5,3,7,3,2,4)
delta - c(1, 0, 1, 1, 1, 0, 1)
# -log likelihood
#alpha-theta[1]
#lamda-theta[2]
ln-function(theta,x1,x2 )
{
Hi Luigi
If it is an excel sheet can you split the excel sheet into sections and import
them that way
There are several ways to import excel
If you only have a text file:
# The good news is that the file is tab delimited although multiple for some
columns
xlines - readLines(G:/1/plate 2.txt)
#
Hi Justin,
As already noted, you want to compare two values in your if
statement. I think you may want to do it like this:
my_fun-function(A,b) {
for(j in 1:3) {
x-A;
while((sum(x[j,])==1)) {
x-x%*%x;
print(x);
if(b%*%x[,j]==b[j]) break;
}
}
}
Jim
Justin USHIZE RUTIKANGA wrote:
Hello list,
I update from R 3.1.3 to R 3.2.0patched today.
For all packages I'm getting error message below
install.packages('bpca_1.2-2.zip', repos=NULL)
Error in install.packages(bpca_1.2-2.zip, repos = NULL) :
type == both cannot be used with 'repos = NULL'
Is it a bug?
Regards,
On 28/04/2015 2:52 AM, Justin USHIZE RUTIKANGA wrote:
Dear All,
I am trying to determine the liming state probability .
my_fun-function(A,b){
for (j in 1:3){
x-A;
while ((sum(x[j,]) ==1) )
{
x - x%*%x;
print (x);
if ( b%*%x==b)
{
break;
}}}
}
A-rbind(c(.5,.3,.2),
Hola José Luis.
Prueba a llamar a R de la siguiente manera:
start /MAX Rgui.exe
... igual te sirve así
(recuerda que Rgui.exe está en /bin/i386 o /bin/x64 , según corresponda)
En caso de que esto no te solucione el problema, revisa en el fichero
/etc/RConsole el valor de MDI.
Un
Hi
x-A%*%A
b%*%x
[,1] [,2] [,3]
[1,] 0.36 0.34 0.3
b%*%x==b
[,1] [,2] [,3]
[1,] FALSE FALSE FALSE
if function expects scalar as input
From help page:
cond = A length-one logical vector that is not NA. Conditions of length greater
than one are accepted with a warning, but only
Dear All,
I am trying to determine the liming state probability .
my_fun-function(A,b){
for (j in 1:3){
x-A;
while ((sum(x[j,]) ==1) )
{
x - x%*%x;
print (x);
if ( b%*%x==b)
{
break;
}}}
}
A-rbind(c(.5,.3,.2), c(.3,.3,.4),c(.1,.5,.4))
b - matrix(data=c(1,0,0), nrow=1, ncol=3,
Hi,How to cite reverse dependancies in the NAMESPACE file in building a package?
Regards,
Carol
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On 28/04/2015 10:05 AM, carol white via R-help wrote:
Hi,Why do I get this warning when I run package.skeleton() and how to solve
this problem?
Warning messages:
1: In package.skeleton(name = myPackage, code_files = ~/Desktop/myPkg/R/) :
Invalid file name(s) for R code in ./myPackage/R:
I have many code files so listing them will be long. When leave it empty, I get
package.skeleton(name = myPackage, code_files = )
Error in sys.source(cf, envir = environment) : '' is not an existing file
There should be an automatic way to source all code files instead of listing
them. Even if
Your function ln() does not return a scalar.
ln(theta=c(1,2))
[1] 48.5342640972 48.5342640972 48.5342640972 48.5342640972 48.5342640972
Bill Dunlap
TIBCO Software
wdunlap tibco.com
On Tue, Apr 28, 2015 at 6:40 PM, Hanze Zhang kevin511...@gmail.com wrote:
I still cannot solve the
yes, reverse dependency. All the reverse dependancies on the main web page of
the packages are generated by CRAN?
Thanks
On Tuesday, April 28, 2015 5:02 PM, Duncan Murdoch
murdoch.dun...@gmail.com wrote:
On 28/04/2015 8:54 AM, carol white via R-help wrote:
Hi,How to cite reverse
To cite related publications, it seems that they can't be mentioned in
DESCRIPTION. Where to mention so that it appears on the 1st page of the pdf
help file and the package main web page? I'm not talking about what is
specified in inst/citation.
Thanks,
Carol
[[alternative HTML
You don't have to do it by hand. Use the list.files function to create the list
of file names.
---
Jeff NewmillerThe . . Go Live...
DCN:jdnew...@dcn.davis.ca.usBasics: ##.#.
On Apr 28, 2015, at 1:15 PM, David Winsemius wrote:
On Apr 28, 2015, at 12:43 PM, Rui Barradas wrote:
Hello,
The error message is quite clear, you must also install package 'quadprog'.
The 'quadprog' pkg is not listed as a dependency or even as 'suggested' and
there is no mention
Reproducible examples help. For package MASS do you mean?
http://cran.r-project.org/web/packages/MASS/index.html
Which provides information about the package and a link to the Reference manual:
http://cran.r-project.org/web/packages/MASS/MASS.pdf
In that manual data sets and functions contain
On Apr 28, 2015, at 12:43 PM, Rui Barradas wrote:
Hello,
The error message is quite clear, you must also install package 'quadprog'.
The 'quadprog' pkg is not listed as a dependency or even as 'suggested' and
there is no mention of 'quadprog' in the NEWS file, nor does a search of the
Hello,I am estimating a system of nonlinear GMM. the following are my objective
function, the gradient function and the optimx code for the optimization. I
actually worked out the gradient and hessian by hand before inputing the code
into r. However, I did get the following error message in my
*John* - Lot's of missing data for height unfortunately. Which is needed
for BMI calculation.
How would I look compare very specific parts of the data, i.e. comparing
YoYo outcomes between F and M position that are both in the
PREMIER_LEAGUE Level?
Still can't figure it out!
Josh
On Tue, Apr
*Edit*
Where F position are in the same AgeGr as well.
Thanks,
Josh
On Tue, Apr 28, 2015 at 9:25 PM, Joshua Dixon joshuamichaeldi...@gmail.com
wrote:
*John* - Lot's of missing data for height unfortunately. Which is
needed for BMI calculation.
How would I look compare very specific
I have a dataset of 20k records heavily right skewed as pareto
distribution, I'd like to pull 1k subset of it with same distribution, any
R package would do that?
Thanks.
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You are posting in HTML and the R-help list is a plain text one. Would you
reset to plain in your e-mail editor before posting, please?
For security reasons R-help strips the HTML version and, we on the list,
receive the resulting plain text. This, often, mangles code to the point that
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Thank you, Ben. I've just subscribed to R-sig-geo as you recommend. I'll post
this staff there.
Antonio Serrano
aasde...@aim.com
ن
-Original Message-
From: Ben Tupper btup...@bigelow.org
To: Antonio Serrano aasde...@aim.com
Cc: r-help r-help@r-project.org
Sent: Mon, Apr 27,
Hola Isa,
En Rstudio, ve a Tools Global options y lo primero que te sale es la
opción de cambiar la versión de R (pestaña General). Dale a Change y
elige la de 32 bits.
Suerte
Paco
El 28/04/2015 a las 09:06, Isa García Barón escribió:
Muchas gracias por las respuestas, pero la verdad es
On 28/04/2015 1:00 PM, carol white via R-help wrote:
To cite related publications, it seems that they can't be mentioned in
DESCRIPTION. Where to mention so that it appears on the 1st page of the pdf
help file and the package main web page? I'm not talking about what is
specified in
Hello dears
I using (R tool) in my project
and I want to compare the results betwen k-mean cluster ,Hierarchical
cluster and EM cluster
I use cluster.stats() it's work on k-mean cluster and hrarichal cluster
but not work in EM
Hello Dears
I Use R tool in my project
I want to do comparison of
On 28/04/2015 1:04 PM, carol white wrote:
yes, reverse dependency. All the reverse dependancies on the main web
page of the packages are generated by CRAN?
Yes.
Duncan Murdoch
Thanks
On Tuesday, April 28, 2015 5:02 PM, Duncan Murdoch
murdoch.dun...@gmail.com wrote:
On
On 28.04.2015 19:04, carol white via R-help wrote:
yes, reverse dependency. All the reverse dependancies on the main web page of
the packages are generated by CRAN?
Yes, and updated once a new package depends on the one in question.
Best,
Uwe Ligges
Thanks
On Tuesday, April 28,
Hi,
apologies in advance for the generic question but I would highly appreciate
if someone pointed me in the right direction.
My challenge: I need to forecast Prices (Gas Electricity Spot). Both gas
and electricity Show Autocorrelative and seasonal (hourly, daily, monthly)
behaviour. And there
Hello everyone,
I have inconsistent results using vegan's capscale() and rda() on a hellinger
distance matrix, based on presence/absence data matrix of 192 plants species
(columns) x 70 sites (rows).
HellingerFloreDist -dist(decostand(flore[12:204], method=hellinger))
I first wanted to
This is off topic here. You might try stats.stack exchange.com.
Be warned that if someone tells you to study only one method they are probably
misleading you (perhaps unintentionally) because every method has the potential
to be wrong in some way.
the main web page is meant the page when a package is accessed on CRAN. So is
it possible on this page that the content of DESCRIPTION is displayed to
display the related publications and also put the related publications so that
they appear on the help pdf file?
On Tuesday, April 28,
an example of a package main web page on
CRANhttp://cran.r-project.org/web/packages/A3/index.html
and the help pdf filehttp://cran.r-project.org/web/packages/A3/A3.pdf
Regards,
On Tuesday, April 28, 2015 7:37 PM, Duncan Murdoch
murdoch.dun...@gmail.com wrote:
On 28/04/2015 1:00
On 28/04/2015 2:28 PM, carol white wrote:
the main web page is meant the page when a package is accessed on CRAN.
So is it possible on this page that the content of DESCRIPTION is
displayed to display the related publications and also put the related
publications so that they appear on the
Hi, R users,
I am using nlm function to get the MLE of parameter alpha and lambda from a
parametric survival model (Weibull distribution). However, this message
always came out: ' invalid function value in 'nlm' optimizer'. Could anyone
help me? Code is
project-read.table(file=C://data.txt,
Why are you doing this instead of using the survival package?
Bert
On Tuesday, April 28, 2015, Hanze Zhang kevin511...@gmail.com wrote:
Hi, R users,
I am using nlm function to get the MLE of parameter alpha and lambda from a
parametric survival model (Weibull distribution). However, this
On 28/04/2015 2:43 AM, Hanze Zhang wrote:
Hi, R users,
I am using nlm function to get the MLE of parameter alpha and lambda from a
parametric survival model (Weibull distribution). However, this message
always came out: ' invalid function value in 'nlm' optimizer'. Could anyone
help me?
Look at the heatmap function
John David Sorkin M.D., Ph.D.
Professor of Medicine
Chief, Biostatistics and Informatics
University of Maryland School of Medicine Division of Gerontology and
Geriatric Medicine
Baltimore VA Medical Center
10 North Greene Street
GRECC (BT/18/GR)
Baltimore,
Hello,I tried installing optimx and got a confirmation that it was installed.
However, anytime I call for it, I received the following error message
library(optimx, lib.loc=~/R/win-library/3.1)Error in loadNamespace(j -
i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) : there is no
Hello,
The error message is quite clear, you must also install package 'quadprog'.
Hope this helps,
Rui Barradas
Em 28-04-2015 20:32, Olufemi Bolarinwa escreveu:
Hello,I tried installing optimx and got a confirmation that it was installed.
However, anytime I call for it, I received the
On Apr 28, 2015, at 12:20 PM, W Z wrote:
I have a dataset of 20k records heavily right skewed as pareto
distribution, I'd like to pull 1k subset of it with same distribution, any
R package would do that?
Why not just:
subdat - dat[sample( nrow(dat), 1000), ] # if dataset is a dataframe
Muchas gracias por las respuestas, pero la verdad es que no he sido capaz
de arreglarlo con ellas. RStudio no me da la posibilidad de elegir con que
versión quiero que funcione.
La solución momentánea que he encontrado es introducir la base de datos y
las posteriores acciones con el paquete RODBC
... Realizing, of course, that after such data dredging, any subsequent
inference is highly biased.
Cheers,
Bert
On Tuesday, April 28, 2015, Jim Lemon drjimle...@gmail.com wrote:
Hi Lalitha,
If you want to find a reasonable model distribution for your data, try
plotting the histogram of the
Dear all,
I need to make a heapmap of SPI results for a monthly timeseies of 30
years. Does anybody know to do it?
Thanks for your help
John
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On 28/04/2015 8:54 AM, carol white via R-help wrote:
Hi,How to cite reverse dependancies in the NAMESPACE file in building a package?
That doesn't make sense. How could you predict which packages will
depend on yours?
Perhaps you mean something different by reverse dependency. The
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