in if (!noCache file.exists(dest) file.info(dest)$mtime :
Fehlender Wert, wo TRUE/FALSE nötig ist
Please could somebody give me an advice. I can not do anything because I
need some packages.
Thanks
Birgit
Birgitle wrote:
Hello R-User!
I am running R 2.8.1 on an Intel Mac.
I just
Solved:
I reinstalled R 2.8.1.
B.
Birgitle wrote:
It is also not possible if I use this commands
install.packages(analogue,/Library/Frameworks/R.framework/Versions/2.8/Resources/library,repos=http://R-Forge.R-project.org;)
Fehler in .readRDS(pfile) : unbekanntes Eingabeformat
Error
Hello R-User!
I am running R 2.8.1 on an Intel Mac.
I just tried to install a package using the GUI and got the following error
message:
Fehler in if (14 + nchar(dcall, type = w) + nchar(sm[1], type = w) :
Fehlender Wert, wo TRUE/FALSE nötig ist
Error in (14 + nchar(dcall, type = w) +
Hello R-list members!
I tried to do the following with my dataset that contains factor and
numerics, (80columns,about 600 rows)
Dataset.afdm-AFDM(Dataset[282:595,], type=TypeVector, ncp=3)
Fehler in svd(X) : infinite or missing values in 'x'
TypeVector
[1] n n n n n n n n n n n n n n n n n n
Hello R-Users!
I need a little help to build up a contingency table out of several
variables.
A-c(F,M,M,F,F,F,F,M,F,M,F,F)
B-c(0,0,0,0,0,0,1,1,1,1,0,1)
C-c(0,1,1,1,1,1,1,1,1,0,0,0)
ABC-as.data.frame(cbind(A,B,C))
ABC
A B C
1 F 0 0
2 M 0 1
3 M 0 1
4 F 0 1
5 F 0 1
6 F 0 1
7
factor
variables due to the way cbind processes the input variables - which is
not intended I think.
You can do sth like
ABC-data.frame(A,B,C)
aggregate(ABC[,2:3],by=list(A),sum)
hth.
Birgitle schrieb:
Hello R-Users!
I need a little help to build up a contingency table out
of the corresponding factor to be counted.
will work. A more sophisticated version could include some factor to
numeric conversion, see FAQ 7.10.
hth.
Birgitle schrieb:
Thanks for your answer.
It is intended, that the variables are treated as class factor, because
these are binary
Thanks Gavin and sorry to all for this unnecessary question.
B.
Gavin Simpson wrote:
On Tue, 2008-09-16 at 10:47 -0700, Birgitle wrote:
Hello R-User!
I try to do the following:
New-iris[c(1:7,90:97),1:5]
New.rpart-rpart(Species~., data=New, method=class)
New.rpart
n= 15
node
Hello R-User!
I try to do the following:
New-iris[c(1:7,90:97),1:5]
New.rpart-rpart(Species~., data=New, method=class)
New.rpart
n= 15
node), split, n, loss, yval, (yprob)
* denotes terminal node
1) root 15 7 versicolor (0.467 0.533) *
Does it mean it is not possible to find
agnes(cluster) to
perform a clustering?
Thanks again
B.
Birgitle wrote:
I try to perform a clustering using an existing dissimilarity matrix that
I calculated using distance (analogue)
I tried two different things. One of them worked and one not and I don`t
understand why.
Here the code
I try to perform a clustering using an existing dissimilarity matrix that I
calculated using distance (analogue)
I tried two different things. One of them worked and one not and I don`t
understand why.
Here the code:
not working example
library(cluster)
library(analogue)
Hello R-User!
When I plot my rpart-object:
plot(data.rpart); text(data.rpart,cex=0.2, use.n=T)
I get this error message
No object with name: PDE
Can somebody tell me why and what the meaning of the message is?
Many thanks in advance
B.
-
The art of living is more like wrestling
I try tu use mob() with my data.frame ('data.frame':288 obs. of 81
variables; factors, numerics and ordered factors)
My response is a binary variable and I should use for modelling a logistic
regression (family=binomial).
I read in the MOB Vignette that I could use a formula like this if I
=glinearModel,
family=binomial())
Fehler in `[.data.frame`(x, r, vars, drop = drop) :
undefined columns selected
B.
Birgitle wrote:
I try tu use mob() with my data.frame ('data.frame': 288 obs. of 81
variables; factors, numerics and ordered factors)
My response is a binary variable
as partitioning variables.
...
What do you mean with linear specification? I would be very happy if you
could explain.
Thanks again
B.
Achim Zeileis wrote:
On Wed, 13 Aug 2008, Birgitle wrote:
I try tu use mob() with my data.frame ('data.frame': 288 obs. of 81
variables; factors
I just started to write tiny functions and therefore I appologise in advance
if I am asking stupid question.
I wrote a tiny function to give me back from the original matrix, a matrix
showing only the values smaller -0.8 and bigger 0.8.
y-c(0.1,0.2,0.3,-0.8,-0.4,0.9)
Many thanks.
Much easier than my solution
B.
Birgitle wrote:
I just started to write tiny functions and therefore I appologise in
advance if I am asking stupid question.
I wrote a tiny function to give me back from the original matrix, a matrix
showing only the values smaller -0.8
Thanks again.
Unfortunately I have always this missing values problem.
But the missings have also a meaning and its impossible to code it
differently or impute.
Also thanks for the explanation. Now I understand.
B.
Achim Zeileis wrote:
On Wed, 13 Aug 2008, Birgitle wrote:
Many thanks
Sorry if this post should be long but I tried to give you a piece of my data
to reproduce my error message using hetcor:
Fehler in result$rho : $ operator is invalid for atomic vectors
Zusätzlich: Warning messages:
1: In polychor(x, y, ML = ML, std.err = std.err) :
1 row with zero marginal
,row.names=1,
na.strings=NA ,colClasses = Classe72)
library(polycor)
TestPart.hetcor-hetcor(TestPart, use=complete.obs)
Mark Difford wrote:
Hi Birgitle,
You need to get this right if someone is going to spend their time helping
you. Your code doesn't work: You have specified more columns
,
na.strings=NA ,colClasses = Classe72)
library(polycor)
TestPart.hetcor-hetcor(TestPart, use=complete.obs)
B.
Birgitle wrote:
Thanks Mark and I am sorry that I forgot to adapt the Classe-vector.
This should work now
library(methods)
setClass(of)
setAs(character, of, function(from
Many Thanks Mark for your answer.
It seems than, that it is not possible to use all variables without somehow
imputing missing values.
But I will try which variables I can finally use.
Many thanks again.
B.
Mark Difford wrote:
Hi Birgitle,
It seems to be failing on those columns
:
## The first fails; the second works
hetcor(TestPart[,c(1:11,13:22,24:43,45:60)], pd=T, std.err=F)
hetcor(TestPart[,c(1:72)], pd=F, std.err=F)
Mark Difford wrote:
Hi Birgitle,
It seems than, that it is not possible to use all variables without
somehow
imputing missing values
sorry here the right thing
a-a[c(1,3,2,4),c(1,3,2,4)]
B.
Birgitle wrote:
You could perhaps do it like that
a-a[c(1,2,4,3),]
B.
Zhang Yanwei - Princeton-MRAm wrote:
Hi all,
I have a 4 by 4 matrix, and I want to switch row 2 and row 3 first,
then switch column 2 and column
You could perhaps do it like that
a-a[c(1,2,4,3),]
B.
Zhang Yanwei - Princeton-MRAm wrote:
Hi all,
I have a 4 by 4 matrix, and I want to switch row 2 and row 3 first, then
switch column 2 and column 3. Is there an easy way to do it?
The following is a tedious way to get what I want.
Hello R-User!
I appologise in advance if this should also go into statistics but I am
presently puzzled.
I have a data.frame (about 300 rows and about 80 variables) and my variables
are dichotomous factors, continuous (numerical) and ordered factors.
I would like to calculate the linear
Many, many thanks that was fast and exactly what I was looking for.
B.
Mark Difford wrote:
Hi Birgitle,
... my variables are dichotomous factors, continuous (numerical) and
ordered factors. ...
Now I am confused what I should use to calculate the correlation using
all my variables
Hello R-User!
I have a data.frame with 82 variables (columns) and 290 rows.
The variables are set to classes factor, ordered factor and numeric.
I used the following code
Matrix.My.data-as.matrix(Df.My.Data[2:82])
Matrix.My.data.rcorr-rcorr(Matrix.My.data, type=spearman)
and got the
I am sorry I just found the stupid mistake.
I did not specify dec=, because I usually use .
Anyway thanks for having the opportunity to get help in this list.
B.
Birgitle wrote:
Hello R-User
I have a table as tab-delimited textfile (291 rows, 83 columns).
The first row are labels
Hello R-Users, again me!
I have a data.frame with 291 rows, 82 columns.
Tha variables in the columns are factors, numerics and ordered factors.
The response variable is a factor with two levels.
I would like to find the best model by trying every possible variable
combination using a logistic
Still the same question:
Birgitle wrote:
I try to use ?randomForest to find variables that are the most important
to divide my dataset (continuous, categorical variables) in two given
groups.
But when I plot the outlier:
plot(outlier(rfObject, cls=groupingVariable),
type=p,col=c(red
R 2.7.2
PPC Mac OS X 10.4.11
library mice 1.13.1
I try to use mice for multivariate data imputation.
My variables are numeric, factors, count data, ordered factors.
First I created a vector for the methods to use with each variable
ImpMethMice-c(rep(logreg, 62), rep(polyreg,1),
I tried to use ctree but am not sure about the meaning of the plot.
My.data.cf-ctree(Resp~., data=My.data)
plot(FemMalSex_NAavoid88.ct)
My data.frame contains 88 explanatory variables (continous,ordered/unordered
multistate,count data) and one response with two groups.
In the plot are only two
I try to use ?randomForest to find variables that are the most important to
divide my dataset (continuous, categorical variables) in two given groups.
But when I plot the outliers:
plot(outlier(FemMalSex_NAavoid88.rf33, cls=FemMalSex_NAavoid88$Sex),
You could have a look at library(analogue) , function ?distance
and library (cluster), function ?agnes
B.
Chua Siang Li wrote:
Hello there. Is there any function in R that can do cluster on a set
of
data that has both categorical and numerical variables? thanks.
siangli
I have an additional question concerning to this topic.
I usually use something liek that:
read.table(, colClasses=c(numeric, factor, character,
my.funny.class))
but why can I not implement ordered.factor in there?
Birgit
Kenn Konstabel wrote:
Conversion to factor may happen (and
I think you should specify your grouping factor:
g a vector or factor object giving the group for the corresponding
elements of x. Ignored if x is a list.
batlett.test(xx, groupingfactor)
Hope this helps.
Birgit
hanen wrote:
i'm trying to test the homogeneity of variance of 92 samples
I have a dist object containing 1 row that is only NA (not very intelligent
to have bas dataset with one NA speciesanyway).
I would like to delete this row from this object.
It may be not a difficult problem but I can not find a solution presently.
So I would be very happy if somebody could
Many thanks.
Is there a way to give me the number of the row, if I have the row name?
B.
mel-10 wrote:
Birgitle a écrit :
I have a dist object containing 1 row that is only NA (not very
intelligent
to have bas dataset with one NA speciesanyway).
I would like to delete this row
Additonally I got this error message
TestDist = Dist.HalbDisGow88[-147,]
Fehler in Dist.HalbDisGow88[-147, ] : falsche Anzahl von Dimensionen
(Error in Dist.HalbDisGow88[-147, ] : wrong number of dimensions
Birgit
mel-10 wrote:
Birgitle a écrit :
I have a dist object containing 1 row
wrote:
Birgitle a écrit :
Many thanks.
Is there a way to give me the number of the row, if I have the row name?
B.
a= object
'w' = name
match('w', names(a))
# or
which(names(a)=='w')
# or
but deletion should work with the number and/or with the name
My dataset contains missing data and I would like to do something like an EM
algorithm or a Markov Chain Monte Carlo approach to get rid of the missing
data.
Is there a function for imputation or simulation of missing data apart from
those in the randomForest library?
Thanks in advance
Birgit
Many thenks to both of you:
Will have a look.
Birgit
Chuck Cleland wrote:
On 6/4/2008 5:32 AM, Birgitle wrote:
My dataset contains missing data and I would like to do something like an
EM
algorithm or a Markov Chain Monte Carlo approach to get rid of the
missing
data
Thanks might be easier in my case because I have so many variables.
Could have found this solution on my own.
Birgit
Rogers, James A [PGRD Groton] wrote:
Birgit Lemcke wrote:
I have a dataframe and two of my variables are in the wrong position
and I would like to swap those
Thanks Paul.
I am not sure if I understood well, but when I do it then I have only two
columns left:
L3 - LETTERS[1:3]
(d - data.frame(cbind(x=1, y=1:10, z=11:20), fac=sample(L3, 10,
replace=TRUE)))
x y z fac
1 1 1 11 C
2 1 2 12 B
3 1 3 13 B
4 1 4 14 C
5 1 5 15 C
6
That works perfect.
Thanks a lot Paul!
Greets
Birgit
Paul Smith wrote:
On Mon, Jun 2, 2008 at 1:04 PM, Birgitle [EMAIL PROTECTED]
wrote:
Thanks Paul.
I am not sure if I understood well, but when I do it then I have only two
columns left:
L3 - LETTERS[1:3]
(d - data.frame(cbind(x
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