[R] Executing a code until a new user input aborts it (readlines?)

Hi, I know that with readlines you can start executing a code upon user input. What I would like to do is to have the ability to abort a code based on a new user input. E.g. when the user hits enter the code stops running. That is, I would periodically check for a user input and stop the code

[R] Determining second coordinate from distance

Hi, I am looking for a function which takes as input the spatial coordinate in longitute/latitude and the distance in metric and returns the second coordinate (of course depending on an angle as well). So far I have only found functions which calculate the distance between two coordinates.

[R] Linkage Disequilibrium Blocks

Hi, I am looking for a package which calculates linkage disequilibrium (LD) blocks similar as in the software Haploview. So far I have found packages which calculate the LD but do not provide methods for determining blocks. Thanks in advance for any hints. Hadassa [[alternative HTML

[R] Connect to server

to a server with a password? Thanks, Hadassa -- Hadassa Brunschwig PhD Student Department of Statistics The Hebrew University of Jerusalem http://www.stat.huji.ac.il [[alternative HTML version deleted]] __ R-help@r-project.org mailing list https

[R] hexadecimal colors

Hi I would like to produce a red shading I figured the easiest way to do that would be to use rgb in the following way: a- seq(0,0.9,by=0.1) redshade - rgb(red=1,green=a, blue=a) However, I don't really know how to plot things using hexadecimal colors. I used a function which tries

[R] xyplot: strip size

Hi, I was wondering if there is a way to control the strip size in xyplot for example using the strip.default function. Or do I need to redraw the strips by myself? I would like to make the strip slimmer and I have reduced the font size using cex. However, I don't know how to change the size of

Re: [R] xyplot: strip size

Thanks that solved my problem. Hadassa On Sun, Mar 7, 2010 at 7:04 PM, Peter Ehlers ehl...@ucalgary.ca wrote: On 2010-03-07 3:12, Hadassa Brunschwig wrote: Hi, I was wondering if there is a way to control the strip size in xyplot for example using the strip.default function. Or do I need

[R] Choose variables according to index

Hi There must have someone already posted this question but I still have not figured how I could do this: Say I have var.1 var.2 var.3 which are large matrices. I would like to do the following loop: for(i in 1:3){ # Pick var.i and do something with it } How can I tell R to do this? Thanks

[R] Moving Average on Defined Intervals

-- Hadassa Brunschwig PhD Student Department of Statistics The Hebrew University of Jerusalem http://www.stat.huji.ac.il __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R

[R] Moving Average on Defined Intervals

-- Hadassa Brunschwig PhD Student Department of Statistics The Hebrew University of Jerusalem http://www.stat.huji.ac.il __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R

[R] Sampling of non-overlapping intervals of variable length

of integers in the interval). I had the idea to sample recursively on a vector with the already chosen intervals discarded but that seems to be too complicated. Any suggestions on that? Thanks a lot. Hadassa -- Hadassa Brunschwig PhD Student Department of Statistics The Hebrew University

Re: [R] Sampling of non-overlapping intervals of variable length

, at 1:05 PM, Hadassa Brunschwig wrote: Hi, I hope I am not repeating a question which has been posed already. I am trying to do the following in the most efficient way: I would like to sample from a finite (large) set of integers n non-overlapping intervals, where each interval i has

Re: [R] Sampling of non-overlapping intervals of variable length

intervals on these vectors. 2)For each sampled vector: apply Chucks solution. ? Thanks a lot. Hadassa On Sun, Jul 19, 2009 at 11:13 PM, Charles C. Berrycbe...@tajo.ucsd.edu wrote: On Sun, 19 Jul 2009, Hadassa Brunschwig wrote: Hi I am not sure what you mean by sampling an index of a group

Re: [R] Character SNP data to binary MAF data

, 2009 at 1:50 AM, Jorge Ivan Velez jorgeivanve...@gmail.com wrote: Hi Hadassa, Do you have a sample of your data and the output you want? It might be useful for us in order to provide any help to you. Regards, Jorge On Wed, Jan 28, 2009 at 8:36 AM, Hadassa Brunschwig hadassa.brunsch

[R] Character SNP data to binary MAF data

-geneticists: I want to have a binary matrix for which in each row the 0 stands for the less frequent character and 1 for the more frequent character. Thanks for any suggestions. Hadassa -- Hadassa Brunschwig PhD Student Department of Statistics The Hebrew University of Jerusalem http

[R] System with manual options

() does not handle manual options (?). Is there thus a way to use these C programs anyway through R (i.e. without touching the C programs and fixing the problem in R)? Thanks a lot for any comments. -- Hadassa Brunschwig PhD Student Department of Statistics The Hebrew University of Jerusalem http

[R] Error in dyn.load()

. Hadassa -- Hadassa Brunschwig PhD Student Department of Statistics The Hebrew University of Jerusalem http://www.stat.huji.ac.il __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http

[R] Makevars

? 4. Does tools.c need to be a shared object as well? Thanks a lot! Hadassa -- Hadassa Brunschwig PhD Student Department of Statistics The Hebrew University of Jerusalem http://www.stat.huji.ac.il __ R-help@r-project.org mailing list https://stat.ethz.ch