[R] coarsening levels problem

Greetings from New Zealand. I hope that my difficulties are clear from the following output. Ideas gratefully received! Murray Jorgensen cc - scan() 3000 3500 2500 2500 3000 3000 3000 3000 3000 2000 2000 2000 2000 4800 3000 4500 3000 2000 2000 4400 3000 3000 2500 3000 3000 2000 3000 2000

Re: [R] coarsening levels problem

: akl other A.K. - Original Message - From: Murray Jorgensen m...@waikato.ac.nz To: r-help r-help@r-project.org Cc: Sent: Saturday, November 17, 2012 4:28 PM Subject: [R] coarsening levels problem Greetings from New Zealand. I hope that my difficulties are clear from the following

[R] Converting Fortran or C++ etc to R

all this is so that I may try out some variants of the program. I expect this will be much easier to do in R! Thanks to all who replied. Murray -- Dr Murray Jorgensen http://www.stats.waikato.ac.nz/Staff/maj.html Department of Statistics, University of Waikato, Hamilton, New Zealand Email

Re: [R] Converting Fortran or C++ etc to R

(C/C++) code at every stage of the rewrite. Don't just write it all in one go and then hope it works! Small steps Barry -- Dr Murray Jorgensen http://www.stats.waikato.ac.nz/Staff/maj.html Department of Statistics, University of Waikato, Hamilton, New Zealand Email: m...@waikato.ac.nz

[R] Converting Fortran or C++ etc to R

I'm going to try my hand at converting some Fortran programs to R. Does anyone know of any good articles giving hints at such tasks? I will post a selective summary of my gleanings. Cheers, Murray -- Dr Murray Jorgensen http://www.stats.waikato.ac.nz/Staff/maj.html Department

Re: [R] Sweaving quotes

this is an issue for the R manuals, see our documentation for ways around this (such as package ae). On Wed, 28 Jul 2010, Marc Schwartz wrote: On Jul 28, 2010, at 7:43 PM, Murray Jorgensen wrote: The significance code line to summary() applied to an lm() fitted model object is Signif. codes: 0

Re: [R] Sweaving quotes

, Murray Jorgensen wrote: The significance code line to summary() applied to an lm() fitted model object is Signif. codes: 0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1 The corresponding line in the LaTeX source produced by Sweave is Signif. codes: 0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1

Re: [R] Sweave and scan()

, Bass,Bass) @ which does give the output I want (though in a different style) and leaves the R session in the state that I want. Thanks for all your help. Murray David Winsemius wrote: On Jul 27, 2010, at 7:01 AM, Murray Jorgensen wrote: Both suggestions generate similar errors to those

Re: [R] Sweave and scan()

. Thank for that. BTW my previous Thanks for all your help was meant to be Thanks to all for your help. Cheers, Murray Duncan Murdoch wrote: On 28/07/2010 6:33 PM, Murray Jorgensen wrote: Omigod! The archival links shows that this was the same problem that caused me to give up on Sweave about 6

[R] Sweaving quotes

Murray Jorgensen http://www.stats.waikato.ac.nz/Staff/maj.html Department of Statistics, University of Waikato, Hamilton, New Zealand Email: m...@waikato.ac.nzmajorgen...@ihug.co.nz Fax 7 838 4155 Phone +64 7 838 4773 wkHome +64 7 825 0441 Mobile 021 0200 8350

Re: [R] Sweaving quotes

Thanks, Marc, and also Jay Kearns. After experimentation I think useFancyQuotes = FALSE my be best as TeX style can look a bit funny for R output. Cheers, Murray Marc Schwartz wrote: On Jul 28, 2010, at 7:43 PM, Murray Jorgensen wrote: The significance code line to summary() applied

Re: [R] Sweave and scan()

Both suggestions generate similar errors to those of the original code. I would also be worried if the results would not puzzle my students. But thanks! Murray David Winsemius wrote: On Jul 26, 2010, at 11:54 PM, Murray Jorgensen wrote: I am introducing the scan() function to my class

[R] Sweave and scan()

() 64 62 Comments would be appreciated. (And thanks to Ross Darnell for a lot of help on another list.) Cheers, Murray Jorgensen -- Dr Murray Jorgensen http://www.stats.waikato.ac.nz/Staff/maj.html Department of Statistics, University of Waikato, Hamilton, New Zealand Email: m

[R] Html help

not include all the packages that I have installed and linked. I don't want to read my html help from the web because sometimes I am off-line or on a slow connection. How do I go about getting a local set of html help files? Cheers, Murray Jorgensen -- Dr Murray Jorgensen http

Re: [R] Html help

:13 a.m., Duncan Murdoch wrote: Murray Jorgensen wrote: I have just installed R 2.11.1 on my XP laptop. I like html help [...] How do I go about getting a local set of html help files? Since 2.10.0, HTML help is generated on demand. It doesn't go off your local computer, it works locally

[R] R or C++ on FreeNX servers

the parallelizing would be handled. Regards, Murray Jorgensen -- Dr Murray Jorgensen http://www.stats.waikato.ac.nz/Staff/maj.html Department of Statistics, University of Waikato, Hamilton, New Zealand Email: m...@waikato.ac.nzFax 7 838 4155 Phone +64 7 838 4773

[R] R or C++ on FreeNX servers

, how the parallelizing would be handled. Regards, Murray Jorgensen -- Dr Murray Jorgensen http://www.stats.waikato.ac.nz/Staff/maj.html Department of Statistics, University of Waikato, Hamilton, New Zealand Email: m...@waikato.ac.nzFax 7 838 4155 Phone

[R] Help with package reshape

2691185 NA 12 NA 2753555 NA 11 NA 308 NA 948 NA 12 34928082511 12 11 Suggestions gratefully received! Regards, Murray Jorgensen -- Dr Murray Jorgensen http

[R] Help with package reshape

1185 NA 12 NA 2753555 NA 11 NA 308 NA 948 NA 12 34928082511 12 11 Suggestions gratefully received! Regards, Murray Jorgensen -- Dr Murray Jorgensen http

Re: [R] two-factor linear models with missing cells

refers to the mean of the (3,4) cell rather than the that of the (1,4) cell making the (3,4) cell a sort of 'honorary' member of the first row. This could have been done to the (2,4) cell but I guess the rule is to drop the cell with the highest sum of row and column number. Murray Jorgensen

[R] two-factor linear models with missing cells

Murray Jorgensen http://www.stats.waikato.ac.nz/Staff/maj.html Department of Statistics, University of Waikato, Hamilton, New Zealand Email: m...@waikato.ac.nzFax 7 838 4155 Phone +64 7 838 4773 wkHome +64 7 825 0441 Mobile 021 0200 8350

[R] two-factor linear models with missing cells

Murray Jorgensen http://www.stats.waikato.ac.nz/Staff/maj.html Department of Statistics, University of Waikato, Hamilton, New Zealand Email: m...@waikato.ac.nzFax 7 838 4155 Phone +64 7 838 4773 wkHome +64 7 825 0441 Mobile 021 0200 8350

[R] Tick label orientation

I had hoped that plot(c(0,24),c(0,-6),xlab=Time,ylab=Day, type=n, main=This Week,axes=FALSE) axis(2,at=0:(-6), labels = c(Sun,Mon,Tues,Wed,Thurs,Fri,Sat),hadj=TRUE) axis(1,at=seq(0,24,4)) would give me horizontal tick labels. It doesn't. What would? Murray -- Dr Murray Jorgensen

Re: [R] sampling from Laplace-Normal

: Theory and Methods, 33(8), 1733-1753. Perhaps you can get around your problem using this representation or alternatively reproduce the problem with one of the component rvs. Cheers, Murray Jorgensen Hi, I have to draw samples from an asymmetric-Laplace-Normal distribution: f(u|y, x, beta

Re: [R] step() and stepAIC()

Prof Brian Ripley wrote: On Sun, 12 Oct 2008, Murray Jorgensen wrote: The birth weight example from ?stepAIC in package MASS runs well as indeed it should. However when I change stepAIC() calls to step() calls I get warning messages that I don't understand, although the output is similar

[R] step() and stepAIC()

with a factor response will be ignored (and three more the same.) Checked with 2.7.0 on Os X and 2.6.2 on Windows. Cheers, Murray -- Dr Murray Jorgensen http://www.stats.waikato.ac.nz/Staff/maj.html Department of Statistics, University of Waikato, Hamilton, New Zealand Email: [EMAIL PROTECTED

Re: [R] lattice plotting character woes

been scanned and cleared by MailMarshal www.marshalsoftware.com ## -- Dr Murray Jorgensen http://www.stats.waikato.ac.nz/Staff/maj.html Department of Statistics, University of Waikato, Hamilton, New Zealand Email: [EMAIL

Re: [R] lattice plotting character woes

1:6 Mark Leeds has pointed out that whatever numbers appear as plotting characters on the screen, they are replaced by circles when you save a pdf via pdf() xyplot() dev.off() I have reproduced this on my Mac. Cheers, Murray -- Dr Murray Jorgensen http://www.stats.waikato.ac.nz/Staff

[R] lattice plotting character woes

20 20 20 I would dearly like to have my plotting symbols indicate the zone but I am frustrated. Curiously I may put other (numeric or character) variable in place of zz and get variable plotting characters. Murray -- Dr Murray Jorgensen http://www.stats.waikato.ac.nz/Staff/maj.html

[R] Extracting formula from an lm object

another linear model of the form z ~ A + B + x for some other response variable z. I would be grateful for any suggestions of a nice way to do this. Cheers, Murray Jorgensen -- Dr Murray Jorgensen http://www.stats.waikato.ac.nz/Staff/maj.html Department of Statistics, University of Waikato

Re: [R] Extracting formula from an lm object

Thanks to Professors Ripley and Turlach for their help. Brian's solution was simple and elegant but Berwin's was also informative. Murray Jorgensen Prof Brian Ripley wrote: On Sun, 24 Aug 2008, Berwin A Turlach wrote: G'day Murray, On Sun, 24 Aug 2008 18:34:39 +1200 Murray Jorgensen [EMAIL

[R] Programming Concepts and Philosophy

rather than using 10 and 120 throughout the script. This sort of stuff is not specifically R but can be a problem for students with little programming background. I am happy to summarise responses. Murray Jorgensen -- Dr Murray Jorgensen http://www.stats.waikato.ac.nz/Staff/maj.html

[R] Recommended Packages

of hundred, and the remained. That way one could install the recommended ones routinely and add in the others as required. Any comments? Murray Jorgensen -- Dr Murray Jorgensen http://www.stats.waikato.ac.nz/Staff/maj.html Department of Statistics, University of Waikato, Hamilton, New Zealand Email

Re: [R] [OT] good reference for mixed models and EM algorithm

. useful although it takes a Bayesian rather than EM approach. Cheers, Murray -- Dr Murray Jorgensen http://www.stats.waikato.ac.nz/Staff/maj.html Department of Statistics, University of Waikato, Hamilton, New Zealand Email: [EMAIL PROTECTED]Fax 7 838 4155 Phone

[R] Reading R-help Digests with Mozilla Thunderbird

in a message. [I'm using Windows XP]. Does anyone know how to turn off this Thunderbird feature? Also what would be the best way to raise this problem with the Thunderbird developers? Cheers, Murray Jorgensen -- Dr Murray Jorgensen http://www.stats.waikato.ac.nz/Staff/maj.html Department