This weekend I noticed that my R2WinBUGS connection was no longer working on
my Windows computer at work AND my Ubuntu linux computer at home. As soon
as WinBUGS opens, the message reads Index Out Of Range. I have un-installed
and re-installed R on both computers and the problem remains the
The ramps package looks very appealing. I have run the examples in the
package .pdf and gone through the .pdf article at the Journal of Statistical
Software, and am very impressed. Is it possible to see a spatio-temporal
example in R script as well? Thanks.
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list.
Paul Heinrich Dietrich wrote:
This seems pretty basic, but I can't get any data to work except for the
documented examples. When the goal is to get to SpatialPixels, here is
what I see...
x - runif(10,1,10)
y - runif(10,1,10)
z - rnorm(10,0,1)
MyData - as.data.frame(cbind(x,y
I'm new to spatial analysis and am exploring numerous packages, mostly
enjoying sp, gstat, and spBayes.
Is there a function that allows the user to dedup a data set with multiple
values at the same coordinates and replace those duplicated values with the
mean at those coordinates? I've written
This seems pretty basic, but I can't get any data to work except for the
documented examples. When the goal is to get to SpatialPixels, here is what
I see...
x - runif(10,1,10)
y - runif(10,1,10)
z - rnorm(10,0,1)
MyData - as.data.frame(cbind(x,y,z))
library(gstat)
coordinates(MyData) -
.
Please write, to me if you find bugs in the plugin.
Jakson
JiHO wrote:
On 2009-May-23 , at 17:40 , Paul Heinrich Dietrich wrote:
I'm interested in easing my way into learning VIM by first using the
Cream
text editor, liking the idea that it will work on both my Linux and
Windows
I'm interested in easing my way into learning VIM by first using the Cream
text editor, liking the idea that it will work on both my Linux and Windows
computers. I've installed Cream on my Linux machine, but can't figure out
how to make Cream talk to R? Does anybody know? I'm using Ubuntu if
here to test
that.
Hope this helps.
Spencer Graves
Paul Heinrich Dietrich wrote:
Hi Spencer,
Thanks for suggesting the genD function. In attempting it, I have
rearranged my function from phat1 ~ ... to ... - 1, it apparently doesn't
like the first one
try and find a ref to get you started.
Murray M Cooper, Ph.D.
Richland Statistics
9800 N 24th St
Richland, MI, USA 49083
Mail: richs...@earthlink.net
- Original Message - From: Paul Heinrich Dietrich
paul.heinrich.dietr...@gmail.com
To: r-help@r-project.org
Sent: Sunday, May 10
-Forge.R-project.org;)'
also supports the following:
pd. - unionRSiteSearch(pd, pds)
attr(pd., 'hits')# 94
HTML(pd.)
Hope this helps.
Spencer Graves
Paul Heinrich Dietrich wrote:
Quick question:
Which function do you use to calculate partial derivatives from
Hi,
I'm not used to thinking along these lines, and wanted to ask your advice:
Suppose you have a sample of around 100, consisting of patients according to
doctors, in which patients and doctors are given a questionnaire with
categorical responses. Each patient somehow has roughly 3 doctors, or
Quick question:
Which function do you use to calculate partial derivatives from a model
equation?
I've looked at deriv(), but think it gives derivatives, not partial
derivatives. Of course my equation isn't this simple, but as an example,
I'm looking for something that let's you control
Thank you for suggesting other functions, I will look into them.
When I read the deriv() function, it did mention partial, but I (being a
newbie) wasn't able to get partials for a simple MNL equation. I'm sure I
did something wrong then, but here's what I tried the following and got
different
Hi,
I'm trying to figure out how to have R estimate partial derivatives for
logit models. As an example, I'm providing a (fake) scored observation in a
MNL with 3 categories of Y and 2 predictors (x01 and x02), and show the
right way to calculate it, but am looking for how to use an R function,
Hi,
I am plotting scatterplots of horsepower by torque, conditional on brand
(I'm just making up the variables for this example), and the goal is to see
both the scatterplot points as well as the smoothed line. When I do the
following code, I get the same color for the points and line, and would
I like the mi package, or when it's too large I use the Amelia package.
evrim akar wrote:
Dear R users,
First of all, thank you for your help about goodness of fit tests.
I have another set of data and i am sure it is incomplete. I searched for
incomplete data analysis with R but I
I just wanted to post in conclusion to this thread that I have had success
running WinBUGS from R via R2WinBUGS, with the help of Gorjanc, Uwe, and Ben
by email outside of this thread.
I may have had a permissions problem, that was probably corrected by
entering this in the terminal:
. The wine version is 1.1.9.
I thought that was the latest,but when I checked latest is 1.1.15, which
does indeed throw the blackbox error.
So, now it does not work for me either
Sorry I gave bad advise
kees
On Thu, 19 Feb 2009 01:38:15 +0100, Paul Heinrich Dietrich
paul.heinrich.dietr
Tobias, this looks great! I'm new to Linux, and I've only installed packages
from within R with install.packages(). I'm guessing that I should unzip
ROpenBUGS to the following path:
/usr/local/lib/R/site-library/
...just checking because I'm new and don't want to do it wrong. Thanks.
PS
winbugs.
I assume you first tried without specifying directories?
The directories you use do not work for me, with WINEPATH the culprit.
If you do not have the latest wine I advise to upgrade not specify
directories.
Good luck,
Kees
On Wed, 18 Feb 2009 01:27:18 +0100, Paul Heinrich
Hi all,
I've managed to get JAGS working on my Ubuntu Hardy Linux with a 32-bit
computer and AMD processors using R 2.8.1. JAGS is great. I've read that
JAGS is the fastest, but that hasn't been my experience. At any rate, I
have more experience with WinBUGS under Windows and would like a
Hi Uwe,
Thank you for your guidance. I have installed R2WinBUGS and WinBUGS14 under
wine. Using ?bugs for help, it tells me:
useWINE: logical; attempt to use the Wine emulator to run 'WinBUGS',
defaults to 'FALSE' on Windows, and 'TRUE' otherwise. Not available in
S-PLUS.
WINE: character,
Hi Max,
Thanks for the suggestion, that's exactly what I was looking for. Thanks
again.
Paul
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View this message in context:
http://www.nabble.com/Optimizing-Multiple-Models...any-suggestions--tp21979556p22006494.html
Sent from the R help mailing list archive at Nabble.com.
There are multiple marketing models in place to predict individual-level
probabilities of whether or not someone would respond to a solicitation,
whether or not they would become a customer, and if they did become a
customer, how much money the company is likely to make. Each individual
receives
thanks to all.
Frank E Harrell Jr wrote:
Paul Heinrich Dietrich wrote:
Hi Frank,
Thanks for the suggestion. It looks like that is an excellent way to
install JAGS. I've also been successful with installing JAGS, but cannot
get the rjags package to install, so I can call JAGS from R. Any
Thanks for the replies, they are helping. I downloaded the recommended
manual, and I'm sure that will help too. When I installed R, I did not
(previously) obtain the R-2.8.1.tar.gz, but tried to follow some
instructions I found elsewhere online (which apparently weren't right). I
did have the
I've read some of R's literature on Linux, including the R Admin manual, and
didn't find it very useful, which is probably my own limitation. But I did
finally manage to get it working well. I'm posting this to help others.
The following worked when installing R 2.8.1 on Ubuntu 8.04 Hardy
I've read some of R's literature on Linux, including the R Admin manual, and
didn't find it very useful, which is probably my own limitation. But I did
finally manage to get it working well. I'm posting this to help others.
The following worked when installing R 2.8.1 on Ubuntu 8.04 Hardy
I would really like to see a good introduction to Emacs, and will check out
that link. I know that Emacs and ESS are supposed to be the best, and are
the most customizable. The reason I put the R Commander GUI instead of
Emacs/ESS is because in my first attempt to get R on Ubuntu Linux, I did
Amendment/Question #1:
When I update.packages(), it tells me that rgl fails to update because it
can't find X11. Again, I'm pretty new to Ubuntu, but it looks like X comes
with Ubuntu. I see files under /etc/X11. Does this mean I need to download
x11-common (or x11-apps, or x11-utils, or one
Hi,
Here is a step-by-step guide to exactly how I've installed R in Ubuntu:
http://www.nabble.com/installing-R-on-Ubuntu-td10025949.html#a21894865
Regarding rjags, here is what happened:
This webpage
(http://yusung.blogspot.com/2009/01/install-jags-and-rjags-in-fedora.html)
recommends logging
Hi Dirk,
Sorry, I'm not trying to drag out the installation process here, but just
trying to get it to work right in Linux.
Dirk Eddelbuettel wrote:
What is wrong with
$ sudo apt-get install r-cran-rgl
I tried this suggestion, and here was the terminal output:
r-cran-rgl is
I'm definitely out of my league here, but I think that if someone only enters
that code in an Ubuntu system, then they will have only the latest version
of R in Ubuntu, which at this time I think is 2.6.2, instead of 2.8.1, and
Ubuntu only maintains a handful of packages, instead of 1600+ right
Thanks John, I appreciate it. It sounds like Emacs is the way to go for an
editor.
John Fox-6 wrote:
Dear Paul,
I haven't read everything in this thread, but have a couple of comments
relative to using the R Commander:
...
The R Commander isn't meant to be a serious programming
Hi Dirk,
Many thanks for your insight.
Dirk Eddelbuettel wrote:
Paul,
Very nice! Comments below.
On 7 February 2009 at 17:12, Paul Heinrich Dietrich wrote:
|
| I've read some of R's literature on Linux, including the R Admin manual,
and
| didn't find it very useful, which
if this helps:http://biostat.mc.vanderbilt.edu/JAGSInstallExample
Improvements to this approach are welcomed.
Frank
Paul Heinrich Dietrich wrote:
Hi,
Here is a step-by-step guide to exactly how I've installed R in Ubuntu:
http://www.nabble.com/installing-R-on-Ubuntu-td10025949.html#a21894865
Hi Brian,
I'm sure buttons are slow compared to keystrokes, but how do you stop R with
a keystroke, similar to the R interface in Windows? Thanks.
Sorry about the JGS-JGR goof...just coming across too many new things right
now. JGR it is.
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Thanks Dirk, it worked like a charm :)
Dirk Eddelbuettel wrote:
On 8 February 2009 at 12:14, Paul Heinrich Dietrich wrote:
| Hi Dirk,
| Sorry, I'm not trying to drag out the installation process here, but
just
| trying to get it to work right in Linux.
|
|
| Dirk Eddelbuettel
Hi all,
I feel very comfortable with R in Windows, and am trying to switch over to
Linux. I have R 2.8.1 on Linux and it works great (so far), except for
instalilng/updating packages. For example, using Emacs with ESS as a text
editor, I entered:
update.packages()
Here are some error
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