Re: [R] Autoregressive covariance structure for lme object and R/SAS differences in model output

2015-02-17 Thread anord
Thanks for your comments. I hard disk meltdown has slowed me down somewhat, but I am now back online. I have reposted to the ME-list, and requested SAS output from my colleagues. I will update the thread again as soon I know more. Thanks, Andreas -- View this message in context:

[R] AR1 covariance structure for lme object and R/SAS differences in model output

2015-02-11 Thread anord
Dear R users, We are working on a data set in which we have measured repeatedly a physiological response variable (y) every 20 min for 12 h (time variable; 'x') in subjects ('id') beloning to one of five groups ('group'; 'A' to 'E'). Data are located at:

Re: [R] Problems with lme random slope+intercept model

2013-10-28 Thread anord
Dear Ben, Thank you, I agree. I have forwarded this to the r-sig-mixed-models list. Best, Andreas -- View this message in context: http://r.789695.n4.nabble.com/Problems-with-lme-random-slope-intercept-model-tp4679104p4679168.html Sent from the R help mailing list archive at Nabble.com.

[R] Problems with lme random slope+intercept model

2013-10-26 Thread anord
Dear all, I'm trying to fit a model on ecological data in which I have measured a few biotic and abiotic factors over the course of a few days in several individuals. Specifically, I'm interested in modelling y ~ x1, with x2, x3, and 'factor' as independent variables. Because data suggests both

[R] glht for lme object with significant interaction term

2011-11-22 Thread anord
Dear all, I'm working on some data from an experiment on the breeding behavior of birds. In short, I have been measuring how the time spent on performing a certain task (variable 'mean_on_active') differs over time (variable 'day', 2 levels) across three experimental categories (variable

Re: [R] Problems with glht function for lme object

2011-01-09 Thread anord
Dear all, Thanks for your input. It works fine now. All it took was for me to tidy up the workspace. Simple solution, that I should have considered earlier. Regards, Andreas -- View this message in context:

[R] Problems with glht function for lme object

2011-01-07 Thread anord
Dear all, I'm trying to make multiple comparisons for an lme-object. The data is for an experiment on parental work load in birds, in which adults at different sites were induced to work at one of three levels ('treat'; H, M, L). The response is 'feedings', which is a quantitative measure of

[R] Crossed random effects in lme

2010-10-18 Thread anord
Dear all, I am trying to fit a model with crossed random effects using lme. In this experiment, I have been measuring oxygen consumption (mlmin) in bird nestlings, originating from three different treatments (treat), in a respirometer with 7 different channels (ch). I have also measured body

[R] random slope models with lme -- failured to converge

2010-02-04 Thread anord
Dear all, I am working on a data set in which I have sequentially measured egg temperatures (eggtemp) in birds incubating in different ambient temperatures (treat, sample data set below), id is not replicated within treatment. id treat eggtemp 1 79 3 30.90166 2 42 3 34.94044