Thank you very much for all the responses; especially Duncan's guidance.
I will add some further ideas on workflows below.
There were quite a few views on GitHub; but there is not much to see, as
there is absolutely no documentation. I have added in the meantime a
basic example:
> Duncan Murdoch
> on Mon, 4 Sep 2023 04:51:32 -0400 writes:
> On 03/09/2023 10:47 p.m., Jeff Newmiller wrote:
>> Leonard... the reason roxygen exists is to allow markup
>> in source files to be used to automatically generate the
>> numerous files required by standard
> Jeff Newmiller
> on Sun, 03 Sep 2023 19:47:32 -0700 writes:
> Leonard... the reason roxygen exists is to allow markup in
> source files to be used to automatically generate the
> numerous files required by standard R packages as
> documented in Writing R Extensions.
On 03/09/2023 10:47 p.m., Jeff Newmiller wrote:
Leonard... the reason roxygen exists is to allow markup in source files to be
used to automatically generate the numerous files required by standard R
packages as documented in Writing R Extensions.
If your goal is to not use source files this
Leonard... the reason roxygen exists is to allow markup in source files to be
used to automatically generate the numerous files required by standard R
packages as documented in Writing R Extensions.
If your goal is to not use source files this way then the solution is to not
use roxygen at
Thank you Bert.
Clarification:
Indeed, I am using an add-on package: it is customary for that package -
that is what I have seen - to have the entire documentation included as
comments in the R src files. (But maybe I am wrong.)
I will try to find some time over the next few days to explore
1. R-package-devel is where queries about package protocols should go.
2. But...
"Is there a succinct, but sufficiently informative description of
documentation tools?"
"Writing R Extensions" (shipped with R) is *the* reference for R
documentation. Whether it's sufficiently "succinct" for you, I
Dear R-List Members,
I am looking for collaborators to further develop the BioShapes
almost-package. I added a brief description below.
A.) BioShapes (Almost-) Package
The aim of the BioShapes quasi-package is to facilitate the generation
of graphical objects resembling biological and
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