Re: [R] Label 2 groups in PCA different colours

2008-09-07 Thread Pedro Mardones
here is a simple approach to, for instance, plot scores for PC1 and PC2 using diff colors: scores - prcomp(yourdata)$x plot(scores[1:100,1], scores[1:100,2], pch = 20, col = blue) points(scores[101:200,1], scores[101:200,2], pch = 20, col = red) PM On Sat, Sep 6, 2008 at 11:44 PM, pgseye [EMAIL

[R] Label 2 groups in PCA different colours

2008-09-06 Thread pgseye
Hi, I'm wanting to do a PCA on some data which is comprised of two different groups (to see how well the groups are discriminated). Is there a way to change the colour of the datapoints in a biplot so that I can easily see which group is which (eg objects 1-100, red, 101-200, black). Might be