Dear all,
I am trying to run a simple R script in batch mode on a cluster. Running a
simple test script with
R CMD BATCH test.R test.Rout
works fine, but as soon as I submit the very same command to the queue and
the job gets sent to a node, the following error is written to test.Rout
Dear R help,
I am using Stata, and I use a Stata ado file (Rsource) to run R in batch
mode within Stata
Everything works fine except for the fact that I cannot export the
graphics that I obtain with my computations written in my R source file
I believe this is related to the global
On May 25, 2012, at 14:46 , Francesco wrote:
Dear R help,
I am using Stata, and I use a Stata ado file (Rsource) to run R in batch
mode within Stata
Everything works fine except for the fact that I cannot export the
graphics that I obtain with my computations written in my R source
, and I use a Stata ado file (Rsource) to run R in batch
mode within Stata
Everything works fine except for the fact that I cannot export the
graphics that I obtain with my computations written in my R source file
I believe this is related to the global Rterm_options `--vanilla
Hello,
I use R in batch mode. Each time, I execute a script, R is loading each
packages I need in my script. That's Ok
But, I had to execute many scripts , and each time R is re-loading the
corresponding packages, which take to much time
Is it possible ask R to load the packages only once
Hello,
I use R in batch mode. Each time, I execute a script, R is loading each
packages I need in my script. That's Ok
But, I had to execute many scripts , and each time R is re-loading the
corresponding packages, which take to much time
Is it possible ask R to load the packages only once
On 07/11/2011 5:49 AM, PALMIER Patrick (Responsable de groupe) - CETE
NP/TM/ST wrote:
Hello,
I use R in batch mode. Each time, I execute a script, R is loading each
packages I need in my script. That's Ok
But, I had to execute many scripts , and each time R is re-loading the
corresponding
Then, the tool executes R in batch mode with the script produced by the tool
The many scripts correspond to the many crosstables people want to do.
It is not possible produce these different scripts and execute all of
them in a unique script with source.
For example, people want to do a crosstable
To: r-help@r-project.org
Subject: [R] R in batch mode packages loading question
Hello,
I use R in batch mode. Each time, I execute a script, R is loading each
packages I need in my script. That's Ok But, I had to execute many scripts ,
and each time R is re-loading the corresponding packages
interactively fields, associated
labels, functions for an automatic crosstable for example
Then, the tool executes R in batch mode with the script produced by the tool
The many scripts correspond to the many crosstables people want to do.
It is not possible produce these different scripts and execute all
, 2011 5:04 PM
To: cornejo...@gmail.com
Cc: r-help@r-project.org
Subject: Re: [R] R in Batch mode
On 11-07-13 4:15 PM, Jorge Cornejo wrote:
Hi, I'm running long code in Batch mode (as a process in ubuntu using
$nohup R CMD BATCH MyCode.R out.out), but every one in a while it
fail and the process
Hi, I'm running long code in Batch mode (as a process in ubuntu using
$nohup R CMD BATCH MyCode.R out.out ), but every one in a while it fail
and the process stops.
When the code finish with no problems, it sends an e-mail, but if fails,
I'm not aware unless I check the working process, and I
On 11-07-13 4:15 PM, Jorge Cornejo wrote:
Hi, I'm running long code in Batch mode (as a process in ubuntu using
$nohup R CMD BATCH MyCode.R out.out), but every one in a while it fail
and the process stops.
When the code finish with no problems, it sends an e-mail, but if fails,
I'm not aware
Hi Everyone,
I am a new R user and trying to run R jobs in batch mode.
Robert Muenchen (2009), in his book R for SAS and SPSS Users, has suggested
writing a small batch file like mR.bat as shown below:
C:\Program File\R\R-2.10.0\bin\Rterm.exe --no-restore --no-save %1
%1.Rout 2 1
: Tuesday, May 24, 2011 1:18 PM
To: Muhuri, Pradip (SAMHSA/CBHSQ)
Cc: R-help@r-project.org
Subject: Re: [R] R in batch mode
Save it anywhere that is on your search path, which can be seen by
typing path into the command line.
On Tue, May 24, 2011 at 12:40 PM, Muhuri, Pradip (SAMHSA/CBHSQ
://cbhsqsurvey.samhsa.gov
-Original Message-
From: Jonathan Daily [mailto:biomathjda...@gmail.com]
Sent: Tuesday, May 24, 2011 1:18 PM
To: Muhuri, Pradip (SAMHSA/CBHSQ)
Cc: R-help@r-project.org
Subject: Re: [R] R in batch mode
Save it anywhere that is on your search path, which can
Hi All:
How does one run R in batch mode on Windows?
Thank you!
Phil Smith
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